RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TRIP6Q15654 476 aaKnown RBP14.95□□□□□ -0.02
DDB1-216ENST00000539739 ZRSR2Q15696 482 aaKnown RBP14.95□□□□□ -0.02
DDB1-216ENST00000539739 CYP2A13Q16696 494 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 PERM1Q5SV97 790 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 ARMC6Q6NXE6 501 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 MBOAT1Q6ZNC8 495 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 SPRED1Q7Z699 444 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 OOSP2Q86WS3 158 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 DEFB124Q8NES8 71 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 OR2L8Q8NGY9 312 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 IL17FQ96PD4 163 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 MENTQ9BUN1 341 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 STOX2Q9P2F5 926 aaPredicted RBP14.95□□□□□ -0.02
DDB1-216ENST00000539739 PLLPQ9Y342 182 aa14.95□□□□□ -0.02
DDB1-216ENST00000539739 IGHV1OR21-1A0A087WYE8 117 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 KRT87PA6NCN2 255 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 OR6C74A6NCV1 312 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 DUX1O43812 170 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 TYROBPO43914 113 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 PLIN3O60664 434 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 SHOX2O60902 331 aaPredicted RBP14.94□□□□□ -0.02
DDB1-216ENST00000539739 TYRP1P17643 537 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 SDHBP21912 280 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 IMPA1P29218 277 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 ILKQ13418 452 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 AMZ1Q400G9 498 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 AGTRAPQ6RW13 159 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 RINLQ6ZS11 566 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 FBXO39Q8N4B4 442 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 PDPRQ8NCN5 879 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 HMGCLL1Q8TB92 370 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 TCP10LQ8TDR4 215 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 DENND1AQ8TEH3 1009 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 ZNF480Q8WV37 535 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 SMPDL3AQ92484 453 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 RHBDF1Q96CC6 855 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 ABCG4Q9H172 646 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 CNOT10Q9H9A5 744 aaKnown RBP14.94□□□□□ -0.02
DDB1-216ENST00000539739 HRASLS2Q9NWW9 162 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 WWOXQ9NZC7 414 aa14.94□□□□□ -0.02
DDB1-216ENST00000539739 OR5K3A6NET4 321 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 H3BQF6 201 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 MATN2O00339 956 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 PRPF4O43172 522 aaKnown RBP eCLIP14.93□□□□□ -0.02
DDB1-216ENST00000539739 B4GAT1O43505 415 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 PROCP04070 461 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 ERGP11308 486 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 EZRP15311 586 aaKnown RBP14.93□□□□□ -0.02
DDB1-216ENST00000539739 ACADVLP49748 655 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 TSTA3Q13630 321 aaPredicted RBP14.93□□□□□ -0.02
DDB1-216ENST00000539739 TTMPQ5BVD1 217 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 YTHDF3Q7Z739 585 aaKnown RBP14.93□□□□□ -0.02
DDB1-216ENST00000539739 GLRX5Q86SX6 157 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 APLFQ8IW19 511 aaPredicted RBP14.93□□□□□ -0.02
DDB1-216ENST00000539739 WDR48Q8TAF3 677 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 RDH11Q8TC12 318 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 NCSTNQ92542 709 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 SLC22A18Q96BI1 424 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 FAM111AQ96PZ2 611 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 ATG10Q9H0Y0 220 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 LRRN3Q9H3W5 708 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 EMCNQ9ULC0 261 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 ENTPD2Q9Y5L3 495 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 ANKRD12Q6UB98 2062 aa14.93□□□□□ -0.02
DDB1-216ENST00000539739 PIPSLA2A3N6 862 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 GSAPA4D1B5 854 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 E7ENX8 843 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 TM9SF1O15321 606 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 IPO13O94829 963 aaKnown RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 ZWINTO95229 277 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 RPLP0P05388 317 aaKnown RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 CHRM5P08912 532 aaPredicted RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 MYL2P10916 166 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 MTHFD2P13995 350 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 POLR2CP19387 275 aaPredicted RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 CCND1P24385 295 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 RPA3P35244 121 aaPredicted RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 CAPZBP47756 277 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 ALDH18A1P54886 795 aaKnown RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 CCL7P80098 99 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 E2F1Q01094 437 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 TAP2Q03519 686 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 NAE1Q13564 534 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 KIR2DS3Q14952 304 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 PFKFB4Q16877 469 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 CAPN13Q6MZZ7 669 aaPredicted RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 RAB44Q7Z6P3 723 aaPredicted RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 ADGRF3Q8IZF5 1079 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 TMEM151AQ8N4L1 468 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 C2orf73Q8N5S3 287 aaPredicted RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 LINC01555Q8NAE3 123 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 RSC1A1Q92681 617 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 MED8Q96G25 268 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 NRTNQ99748 197 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 DPYSL5Q9BPU6 564 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 CCDC177Q9NQR7 707 aaPredicted RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 PTBP2Q9UKA9 531 aaKnown RBP14.92□□□□□ -0.02
DDB1-216ENST00000539739 PCDHGA1Q9Y5H4 931 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 ASXL3Q9C0F0 2248 aa14.92□□□□□ -0.02
DDB1-216ENST00000539739 C2orf74A8MZ97 194 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms