RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 SLC26A3P40879 764 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 CCNFP41002 786 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 GLRBP48167 497 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 E2F1Q01094 437 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TAP2Q03519 686 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 SP140Q13342 867 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 MPP2Q14168 576 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 KRT33BQ14525 404 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 C16orf72Q14CZ0 275 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 PLCL1Q15111 1095 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 ZIC1Q15915 447 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 ISXQ2M1V0 245 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TECRLQ5HYJ1 363 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 LRRC8EQ6NSJ5 796 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TMEM71Q6P5X7 295 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 RAPH1Q70E73 1250 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 ARHGAP22Q7Z5H3 698 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 CCDC91Q7Z6B0 441 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TRIM73Q86UV7 250 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TAX1BP1Q86VP1 789 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 RCBTB1Q8NDN9 531 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 OR4D9Q8NGE8 314 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 OR10G6Q8NH81 332 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 MDM1Q8TC05 714 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 PRR11Q96HE9 360 aaPredicted RBP12.56□□□□□ -0.4
CCDC42-202ENST00000539522 CCDC74BQ96LY2 380 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TMEM79Q9BSE2 394 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 VPS11Q9H270 941 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 SRMSQ9H3Y6 488 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 STN1Q9H668 368 aaKnown RBP12.56□□□□□ -0.4
CCDC42-202ENST00000539522 INTS9Q9NV88 658 aaKnown RBP12.56□□□□□ -0.4
CCDC42-202ENST00000539522 HRASLS2Q9NWW9 162 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 MKS1Q9NXB0 559 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 UTP6Q9NYH9 597 aaKnown RBP12.56□□□□□ -0.4
CCDC42-202ENST00000539522 TLK1Q9UKI8 766 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 KLK13Q9UKR3 277 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 POMT2Q9UKY4 750 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 EMCNQ9ULC0 261 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 GRID1Q9ULK0 1009 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 OARD1Q9Y530 152 aa12.56□□□□□ -0.4
CCDC42-202ENST00000539522 A0A087X1B8 175 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 IGKV1-8A0A0C4DH67 115 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 FAM221BA6H8Z2 402 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 DUX1O43812 170 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 CSO75390 466 aaKnown RBP12.55□□□□□ -0.4
CCDC42-202ENST00000539522 CATP04040 527 aaKnown RBP12.55□□□□□ -0.4
CCDC42-202ENST00000539522 GSTA1P08263 222 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 LTA4HP09960 611 aaKnown RBP12.55□□□□□ -0.4
CCDC42-202ENST00000539522 COL6A2P12110 1019 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 PVRP15151 417 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 UGT2B7P16662 529 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 TFEBP19484 476 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 PRDX3P30048 256 aaKnown RBP12.55□□□□□ -0.4
CCDC42-202ENST00000539522 SHMT2P34897 504 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 RPA3P35244 121 aaPredicted RBP12.55□□□□□ -0.4
CCDC42-202ENST00000539522 PNLIPRP1P54315 467 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 TARDBPQ13148 414 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCDC42-202ENST00000539522 SPIDRQ14159 915 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 TGFBIQ15582 683 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 FBXO48Q5FWF7 155 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 SUSD1Q6UWL2 747 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 RBM44Q6ZP01 1051 aaKnown RBP12.55□□□□□ -0.4
CCDC42-202ENST00000539522 FAM92BQ6ZTR7 304 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 LCA5Q86VQ0 697 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 CACTIN-AS1Q8N1I8 211 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 OR2A1Q8NGT9 310 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 PMEPA1Q969W9 287 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 APOPT1Q96IL0 206 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 FOPNLQ96NB1 174 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 TGM7Q96PF1 710 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 OR4K3Q96R72 315 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 MAP3K3Q99759 626 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 CAPS2Q9BXY5 557 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 PITPNM3Q9BZ71 974 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 IQCGQ9H095 443 aaKnown RBP12.55□□□□□ -0.4
CCDC42-202ENST00000539522 C12orf65Q9H3J6 166 aaKnown RBP12.55□□□□□ -0.4
CCDC42-202ENST00000539522 ALG9Q9H6U8 611 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 SYNDIG1Q9H7V2 258 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 PCMTD2Q9NV79 361 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 ACTR10Q9NZ32 417 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 OR6C2Q9NZP2 312 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 TMEM216Q9P0N5 145 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 SPATA7Q9P0W8 599 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 KLHL20Q9Y2M5 609 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 PLLPQ9Y342 182 aa12.55□□□□□ -0.4
CCDC42-202ENST00000539522 MED19A0JLT2 244 aaPredicted RBP12.54□□□□□ -0.4
CCDC42-202ENST00000539522 AGRPO00253 132 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
CCDC42-202ENST00000539522 RPN2P04844 631 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 CTSBP07858 339 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 ST6GAL1P15907 406 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 AMD1P17707 334 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 CCKBRP32239 447 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 SLC6A12P48065 614 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 ATP6V0D1P61421 351 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 BIRC2Q13490 618 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 CLPPQ16740 277 aaPredicted RBP12.54□□□□□ -0.4
CCDC42-202ENST00000539522 HHATQ5VTY9 493 aa12.54□□□□□ -0.4
CCDC42-202ENST00000539522 ANKS6Q68DC2 871 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms