RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 H7C2Y5 167 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 FABP7O15540 132 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 SNAPC5O75971 98 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 CSF2P04141 144 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 IFNA4P05014 189 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 FGF4P08620 206 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 ARSAP15289 507 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 SYN1P17600 705 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 AZGP1P25311 298 aaKnown RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 YWHABP31946 246 aaKnown RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 EPHA5P54756 1037 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 BTG1P62324 171 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 RPA4Q13156 261 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 EIF4HQ15056 248 aaKnown RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 WSCD2Q2TBF2 565 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 KIAA1614Q5VZ46 1190 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 LAIR1Q6GTX8 287 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 C19orf48Q6RUI8 117 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 SIAH1Q8IUQ4 282 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 HS3ST5Q8IZT8 346 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 CAMKK1Q8N5S9 505 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 DPP10Q8N608 796 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 C19orf18Q8NEA5 215 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 PITX2Q99697 317 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 OMDQ99983 421 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 GAL3ST1Q99999 423 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 ASB7Q9H672 318 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 UCK1Q9HA47 277 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 BIN3Q9NQY0 253 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 COPZ2Q9P299 210 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 PSORS1C1Q9UIG5 152 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 OGDHLQ9ULD0 1010 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 GREB1LQ9C091 1923 aaPredicted RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 LRRC72A6NJI9 287 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 ERI2A8K979 691 aaKnown RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 MPTX1A8MV57 137 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 SMLR1H3BR10 107 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 DPYSL4O14531 572 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 GSTA4O15217 222 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 ATP6AP2O75787 350 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 SAT1P21673 171 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 HOXA13P31271 388 aaPredicted RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 GRK5P34947 590 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 IFRD2Q12894 506 aaPredicted RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 ZNF124Q15973 351 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 GRIK4Q16099 956 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 GTDC1Q4AE62 458 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 FLYWCH1Q4VC44 716 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 TECRLQ5HYJ1 363 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 FAM102AQ5T9C2 384 aaPredicted RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 ASPGQ86U10 573 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 TTC29Q8NA56 475 aaPredicted RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 ACVR1CQ8NER5 493 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 OR52N1Q8NH53 320 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 CREB3L1Q96BA8 519 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 L3HYPDHQ96EM0 354 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 TMEM74Q96NL1 305 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 MND1Q9BWT6 205 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 MRPL4Q9BYD3 311 aaKnown RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 BRD7Q9NPI1 651 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 RGS18Q9NS28 235 aa12.14□□□□□ -0.47
USP3-203ENST00000538686 GPN3Q9UHW5 284 aaPredicted RBP12.14□□□□□ -0.47
USP3-203ENST00000538686 FAM240BA0A1B0GVZ2 78 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 SLC22A23A1A5C7 686 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 SCELO95171 688 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 LALBAP00709 142 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 C1RP00736 705 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 PGRP06401 933 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 OR56A5P0C7T3 313 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 RELQ04864 619 aaPredicted RBP12.13□□□□□ -0.47
USP3-203ENST00000538686 BAATQ14032 418 aaPredicted RBP12.13□□□□□ -0.47
USP3-203ENST00000538686 SIM2Q14190 667 aaPredicted RBP12.13□□□□□ -0.47
USP3-203ENST00000538686 FGFBP1Q14512 234 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 GPR68Q15743 365 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 SMAD1Q15797 465 aaKnown RBP12.13□□□□□ -0.47
USP3-203ENST00000538686 CYP27C1Q4G0S4 372 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 IQCCQ4KMZ1 466 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 SNX20Q7Z614 316 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 JAZF1Q86VZ6 243 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 PHYKPLQ8IUZ5 450 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 SLC41A1Q8IVJ1 513 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 C4orf19Q8IY42 314 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 OR8J3Q8NGG0 315 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 TFAP2BQ92481 460 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 WBP1Q96G27 269 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 REG4Q9BYZ8 158 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 GSTO2Q9H4Y5 243 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 TNFRSF12AQ9NP84 129 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 DDX4Q9NQI0 724 aaKnown RBP12.13□□□□□ -0.47
USP3-203ENST00000538686 FBXO10Q9UK96 956 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 PCOLCE2Q9UKZ9 415 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 GPR45Q9Y5Y3 372 aa12.13□□□□□ -0.47
USP3-203ENST00000538686 DICER1Q9UPY3 1922 aaKnown RBP12.13□□□□□ -0.47
USP3-203ENST00000538686 FABP12A6NFH5 140 aa12.12□□□□□ -0.47
USP3-203ENST00000538686 A8MXK9 166 aa12.12□□□□□ -0.47
USP3-203ENST00000538686 E9PAM4 449 aa12.12□□□□□ -0.47
USP3-203ENST00000538686 IFRD1O00458 451 aaPredicted RBP12.12□□□□□ -0.47
USP3-203ENST00000538686 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
USP3-203ENST00000538686 PLA2G10O15496 165 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms