RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 KELP23276 732 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 VARSP26640 1264 aaKnown RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 KLRK1P26718 216 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 MAP2K3P46734 347 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 NRIP1P48552 1158 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 CD97P48960 835 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 HLCSP50747 726 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 AP1S1P61966 158 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 ABHD18Q0P651 414 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 DCDC5Q6ZRR9 648 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 SCML4Q8N228 414 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 METTL25Q8N6Q8 603 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 SOCS4Q8WXH5 440 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 MRPL45Q9BRJ2 306 aaKnown RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 MAGEH1Q9H213 219 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 RHBGQ9H310 441 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 MKKSQ9NPJ1 570 aaPredicted RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 TAS2R9Q9NYW1 312 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 RIMKLBQ9ULI2 386 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 PCDHGB5Q9Y5G0 923 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 COLEC10Q9Y6Z7 277 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 ADGRB1O14514 1584 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 SLC15A5A6NIM6 579 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 J3QRK9 145 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 GOT2P00505 430 aaKnown RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 NMBRP28336 390 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 AQP1P29972 269 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 CMPK1P30085 196 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 MAP3K8P41279 467 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 HCAR3P49019 387 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 DNASE1L3Q13609 305 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 KCNJ11Q14654 390 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 KANK2Q63ZY3 851 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 GID4Q8IVV7 300 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 CYP4X1Q8N118 509 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 SLC35B2Q8TB61 432 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 SETD6Q8TBK2 473 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 DNASE1L2Q92874 299 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 FBXL8Q96CD0 374 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 PIWIL1Q96J94 861 aaKnown RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 FTHL17Q9BXU8 183 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 EXO5Q9H790 373 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 FAM120CQ9NX05 1096 aaKnown RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 TAS2R3Q9NYW6 316 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 POLLQ9UGP5 575 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 SALL4Q9UJQ4 1053 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 DDTLA6NHG4 134 aaPredicted RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 YDJCA8MPS7 323 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 E9PAM4 449 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 RBMXL2O75526 392 aaKnown RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 RFPL1O75677 317 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 VNN2O95498 520 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 CRYZL1O95825 349 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 H1F0P07305 194 aaKnown RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 UNGP13051 313 aaPredicted RBP6.78□□□□□ -1.32
SORT1-209ENST00000538502 ZNF823P16415 610 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 CHRNB2P17787 502 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 PPP5CP53041 499 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 MTPNP58546 118 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 E2F1Q01094 437 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 ZNF33AQ06730 810 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 DPYSL2Q16555 572 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 RHBDF2Q6PJF5 856 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 PSD4Q8NDX1 1056 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 OR4K2Q8NGD2 314 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 OR5B17Q8NGF7 314 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 XAGE5Q8WWM1 108 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 MSANTD3Q96H12 275 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 FCRL5Q96RD9 977 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 KXD1Q9BQD3 176 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 PCDHAC1Q9H158 963 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 ACP6Q9NPH0 428 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 ENAMQ9NRM1 1142 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 MAP10Q9P2G4 905 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 MROH1Q8NDA8 1641 aa6.78□□□□□ -1.32
SORT1-209ENST00000538502 TRAPPC13A5PLN9 417 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 ISM1B1AKI9 464 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 H0YGN5 161 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 HOXD8P13378 290 aaPredicted RBP6.77□□□□□ -1.32
SORT1-209ENST00000538502 MYF6P23409 242 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 GADD45AP24522 165 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 PCDH1Q08174 1060 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 GRK1Q15835 563 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 RABL3Q5HYI8 236 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 MBLAC2Q68D91 279 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 DUS1LQ6P1R4 473 aaKnown RBP6.77□□□□□ -1.32
SORT1-209ENST00000538502 VGLL2Q8N8G2 317 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 GNPDA2Q8TDQ7 276 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 OSTF1Q92882 214 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 ZNF599Q96NL3 588 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 KCNC2Q96PR1 638 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 CYP2S1Q96SQ9 504 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 NDUFAF4Q9P032 175 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 ASF1AQ9Y294 204 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 NFS1Q9Y697 457 aa6.77□□□□□ -1.32
SORT1-209ENST00000538502 C2CD4BA6NLJ0 364 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 B8ZZF3 427 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 AMHP03971 560 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 MATN1P21941 496 aa6.77□□□□□ -1.33
SORT1-209ENST00000538502 DDX6P26196 483 aaKnown RBP eCLIP6.77□□□□□ -1.331e-7■■■□□ 16.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms