RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 NLE1Q9NVX2 485 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 C3orf18Q9UK00 162 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ERGIC3Q9Y282 383 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 MRPS7Q9Y2R9 242 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 PKD1L3Q7Z443 1732 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 MYH8P13535 1937 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 PSMD9O00233 223 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 SETD1AO15047 1707 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 SERPINA1P01009 418 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ALOX12P18054 663 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 MYL9P24844 172 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 LSM3P62310 102 aaKnown RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 FAM92BQ6ZTR7 304 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 OR9A1PQ8NGU1 263 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 PHOSPHO2Q8TCD6 241 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 EPB41L1Q9H4G0 881 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 ZNF358Q9NW07 568 aa5.24□□□□□ -1.57
LRP6-203ENST00000538239 C19orf25Q9UFG5 118 aaPredicted RBP5.24□□□□□ -1.57
LRP6-203ENST00000538239 TSPAN6O43657 245 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 DUX1O43812 170 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 EDF1O60869 148 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 KHDRBS3O75525 346 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 STX11O75558 287 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 MT-ND1P03886 318 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 JUNP05412 331 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 PRPS2P11908 318 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 POU2F1P14859 743 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 JUPP14923 745 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 DRD4P21917 467 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 RBMS1P29558 406 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 HERVK_113P63132 956 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 KLF1Q13351 362 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 MAPK11Q15759 364 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 RBM20Q5T481 1227 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 MZT2AQ6P582 158 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZC3H14Q6PJT7 736 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 LRRC70Q7Z2Q7 622 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 GOLGA7Q7Z5G4 137 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ATCAYQ86WG3 371 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLC22A15Q8IZD6 547 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 NAT8LQ8N9F0 302 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 PIGXQ8TBF5 258 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 HM13Q8TCT9 377 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLC13A3Q8WWT9 602 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SLC5A11Q8WWX8 675 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 GTPBP3Q969Y2 492 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZBED3Q96IU2 234 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 ERVK-6Q9BXR3 956 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 WDR6Q9NNW5 1121 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 C11orf16Q9NQ32 467 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 VPS29Q9UBQ0 182 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZNF860A6NHJ4 632 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ELOA3DA6NLF2 546 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 CXorf49A8MYA2 514 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 SCDO00767 359 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 NPHS1O60500 1241 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 TMCC2O75069 709 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 WBP4O75554 376 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 TNFAIP8O95379 198 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 IFNW1P05000 195 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 CHRNGP07510 517 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 OMPP47874 163 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 IDH3AP50213 366 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ACTR3P61158 418 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 RPS13P62277 151 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 RHAGQ02094 409 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 LIPEQ05469 1076 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 CCNIQ14094 377 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 MED22Q15528 200 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ELOA3BQ3SY89 546 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 C1orf189Q5VU69 101 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 MRPL10Q7Z7H8 261 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 IQCHQ86VS3 1027 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZNF761Q86XN6 746 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 CHERPQ8IWX8 916 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 SAMD14Q8IZD0 417 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 LNX2Q8N448 690 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 C1orf52Q8N6N3 182 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 ELOA3Q8NG57 546 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 DENND1AQ8TEH3 1009 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 CCDC28BQ9BUN5 200 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 XYLT2Q9H1B5 865 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 USP29Q9HBJ7 922 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 SERINC1Q9NRX5 453 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ADAMTS5Q9UNA0 930 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 TESMINQ9Y4I5 508 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 CPSF4LA6NMK7 179 aaKnown RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 RIIAD1A6NNX1 92 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 KERAO60938 352 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZNF217O75362 1048 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZBTB11O95625 1053 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 CXCR1P25024 350 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 CTSKP43235 329 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 ITGA1P56199 1179 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 QPCTQ16769 361 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 EIPR1Q53HC9 387 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 DRICH1Q6PGQ1 229 aaPredicted RBP5.23□□□□□ -1.57
LRP6-203ENST00000538239 ZNF783Q6ZMS7 281 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 KBTBD6Q86V97 674 aa5.23□□□□□ -1.57
LRP6-203ENST00000538239 C11orf65Q8NCR3 313 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms