RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 OPTCQ9UBM4 332 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 POLG2Q9UHN1 485 aa15.16■□□□□ 0.02
SFSWAP-206ENST00000537582 A0A1W2PPV9 198 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 LNP1A1A4G5 178 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 TMEM114B3SHH9 223 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 TMEM233B4DJY2 109 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 K7EPI3 171 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 KHNYNO15037 678 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 NPHS1O60500 1241 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 PRAMEF4O60810 478 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 H2AFYO75367 372 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 HSPA4LO95757 839 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 GRK2P25098 689 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 PEBP1P30086 187 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 RAB28P51157 221 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SH3BP2P78314 561 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 ASPHQ12797 758 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 C6orf132Q5T0Z8 1188 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 PRAMEF9Q5VWM5 478 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 CGB2Q6NT52 195 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 OGFOD3Q6PK18 319 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 THOC6Q86W42 341 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 C17orf82Q86X59 251 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 FAM20CQ8IXL6 584 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SLC35F3Q8IY50 421 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 MINDY1Q8N5J2 469 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 ZNF781Q8N8C0 355 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 GPR156Q8NFN8 814 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 LCN9Q8WX39 176 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SREK1Q8WXA9 508 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 ATL1Q8WXF7 558 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 ATOH1Q92858 354 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 ACAT2Q9BWD1 397 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 TBC1D10AQ9BXI6 508 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 NUSAP1Q9BXS6 441 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 FAM107BQ9H098 131 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SLC32A1Q9H598 525 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 NOL11Q9H8H0 719 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 RXFP3Q9NSD7 469 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 PNPOQ9NVS9 261 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SPHK1Q9NYA1 384 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SPATA7Q9P0W8 599 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 MARCOQ9UEW3 520 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 ZNF225Q9UK10 706 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 TNPO3Q9Y5L0 923 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 CSNK1G3Q9Y6M4 447 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 OR5K4A6NMS3 321 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 CASC3O15234 703 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 EDF1O60869 148 aaKnown RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SYPP08247 313 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 NDUFS1P28331 727 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 CCT8P50990 548 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 FOXA1P55317 472 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 PLCL1Q15111 1095 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 RBBP7Q16576 425 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 C14orf28Q4W4Y0 310 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 IL27RAQ6UWB1 636 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 LRRC70Q7Z2Q7 622 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SYVN1Q86TM6 617 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SLC9B2Q86UD5 537 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 CHMP6Q96FZ7 201 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 CNDP1Q96KN2 507 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 KCNA7Q96RP8 456 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 SGPP1Q9BX95 441 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 DNAJC11Q9NVH1 559 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 THAP1Q9NVV9 213 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 ZDHHC2Q9UIJ5 367 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 LNPEPQ9UIQ6 1025 aa15.15■□□□□ 0.02
SFSWAP-206ENST00000537582 BTN3A3O00478 584 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 KATNA1O75449 491 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 CER1O95813 267 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 RETP07949 1114 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 KITP10721 976 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 SLC2A4P14672 509 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 ERVPABLB-1P60509 514 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 SPEM2Q0P670 501 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 TRAF3Q13114 568 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 CUZD1Q86UP6 607 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 AMIGO1Q86WK6 493 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 KLHDC8AQ8IYD2 350 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 SDR16C5Q8N3Y7 309 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 OR2L8Q8NGY9 312 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 AGAP11Q8TF27 550 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 IPPKQ9H8X2 491 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 MID1IP1Q9NPA3 183 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 CCDC177Q9NQR7 707 aaPredicted RBP15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 TAC3Q9UHF0 121 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 BTBD3Q9Y2F9 522 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 FIS1Q9Y3D6 152 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 ANGPTL3Q9Y5C1 460 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 RNF215Q9Y6U7 377 aa15.14■□□□□ 0.01
SFSWAP-206ENST00000537582 GMNCA6NCL1 334 aa15.13■□□□□ 0.01
SFSWAP-206ENST00000537582 ERICH4A6NGS2 130 aa15.13■□□□□ 0.01
SFSWAP-206ENST00000537582 E7EQ34 232 aa15.13■□□□□ 0.01
SFSWAP-206ENST00000537582 SIGLEC6O43699 453 aa15.13■□□□□ 0.01
SFSWAP-206ENST00000537582 NPPBP16860 134 aa15.13■□□□□ 0.01
SFSWAP-206ENST00000537582 TYRP1P17643 537 aa15.13■□□□□ 0.01
SFSWAP-206ENST00000537582 DRD4P21917 467 aa15.13■□□□□ 0.01
SFSWAP-206ENST00000537582 FASLGP48023 281 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms