RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 SIX1Q15475 284 aaPredicted RBP8.06□□□□□ -1.12
DDB1-208ENST00000537120 TPSAB1Q15661 275 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 FAM214AQ32MH5 1076 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 TCTE1Q5JU00 501 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 RNF187Q5TA31 235 aaPredicted RBP8.06□□□□□ -1.12
DDB1-208ENST00000537120 RHBDD2Q6NTF9 364 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 NEPROQ6NW34 567 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 FAM198BQ6UWH4 519 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 ZNF662Q6ZS27 426 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 HPS6Q86YV9 775 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 CLEC1AQ8NC01 280 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 FDCSPQ8NFU4 85 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 CPT1CQ8TCG5 803 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 LKAAEAR1Q8TD35 194 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 ZUFSPQ96AP4 578 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 FAM136AQ96C01 138 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 MFSD3Q96ES6 412 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 VPS50Q96JG6 964 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 PBKQ96KB5 322 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 MIPEPQ99797 713 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 SELENOSQ9BQE4 189 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 KIFC1Q9BW19 673 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 YIPF2Q9BWQ6 316 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 CHRNA10Q9GZZ6 450 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 MRM3Q9HC36 420 aaKnown RBP8.06□□□□□ -1.12
DDB1-208ENST00000537120 ATP13A2Q9NQ11 1180 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 TREX1Q9NSU2 369 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 ABCF3Q9NUQ8 709 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 VPS9D1Q9Y2B5 631 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 PPP2R2CQ9Y2T4 447 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 PCDHGB7Q9Y5F8 929 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 MAD1L1Q9Y6D9 718 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 FAM169AQ9Y6X4 670 aa8.06□□□□□ -1.12
DDB1-208ENST00000537120 TNRC6AQ8NDV7 1962 aaKnown RBP8.06□□□□□ -1.12
DDB1-208ENST00000537120 CCDC88CQ9P219 2028 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 TCRBV7S3A2A0A539 114 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 TARM1B6A8C7 271 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 GOLGA8MH3BSY2 632 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 HCRTR1O43613 425 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 NIPSNAP2O75323 286 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 AVILO75366 819 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 FKBP9O95302 570 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 C1orf105O95561 183 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 SYF2O95926 243 aaKnown RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 ESR1P03372 595 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 PDGFAP04085 211 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 CTSBP07858 339 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 ERVK-10P10266 1014 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 PKMP14618 531 aaKnown RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 ITGAXP20702 1163 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 RPS3P23396 243 aaKnown RBP eCLIP8.05□□□□□ -1.125e-7■■■□□ 16.2
DDB1-208ENST00000537120 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 CMPK1P30085 196 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 PEBP1P30086 187 aaKnown RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 RPA3P35244 121 aaPredicted RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 BDKRB1P46663 353 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 VSX2P58304 361 aaPredicted RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 DHX34Q14147 1143 aaKnown RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 KCTD19Q17RG1 926 aaPredicted RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 TTLL9Q3SXZ7 439 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 NADK2Q4G0N4 442 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 ANKRD20A4Q4UJ75 823 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 WASHC2DQ5SRD0 308 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 YOD1Q5VVQ6 348 aaPredicted RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 OVCH1Q7RTY7 1134 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 PRELID2Q8N945 189 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 OR2Y1Q8NGV0 311 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 FLVCR1-AS1Q8TAF5 88 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 ADAMTS17Q8TE56 1095 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 MIB2Q96AX9 1013 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 ZNF669Q96BR6 464 aaPredicted RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 MS4A14Q96JA4 679 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 GBP5Q96PP8 586 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 ACAT2Q9BWD1 397 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 P2RY12Q9H244 342 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 LRRC4CQ9HCJ2 640 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 FAM114A2Q9NRY5 505 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 CUTCQ9NTM9 273 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 UTP6Q9NYH9 597 aaKnown RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 IL1RAPL1Q9NZN1 696 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 LUZP4Q9P127 313 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 ZC3H7BQ9UGR2 993 aaKnown RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 CDC23Q9UJX2 597 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 SOX13Q9UN79 622 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 RUVBL2Q9Y230 463 aaKnown RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 NFS1Q9Y697 457 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 UBR5O95071 2799 aaPredicted RBP8.05□□□□□ -1.12
DDB1-208ENST00000537120 PCM1Q15154 2024 aa8.05□□□□□ -1.12
DDB1-208ENST00000537120 DOPEY2Q9Y3R5 2298 aa8.04□□□□□ -1.12
DDB1-208ENST00000537120 A0A0J9YVX5 310 aa8.04□□□□□ -1.12
DDB1-208ENST00000537120 GOLGA6L10A0A0M3HER8 536 aa8.04□□□□□ -1.12
DDB1-208ENST00000537120 A0A1B0GX78 115 aa8.04□□□□□ -1.12
DDB1-208ENST00000537120 HYKKA2RU49 373 aa8.04□□□□□ -1.12
DDB1-208ENST00000537120 ZNF839A8K0R7 811 aa8.04□□□□□ -1.12
DDB1-208ENST00000537120 CYSRT1A8MQ03 144 aa8.04□□□□□ -1.12
DDB1-208ENST00000537120 DSCR3O14972 297 aa8.04□□□□□ -1.12
DDB1-208ENST00000537120 SRPX2O60687 465 aaPredicted RBP8.04□□□□□ -1.12
DDB1-208ENST00000537120 KLF7O75840 302 aaPredicted RBP8.04□□□□□ -1.12
DDB1-208ENST00000537120 IPO13O94829 963 aaKnown RBP8.04□□□□□ -1.12
DDB1-208ENST00000537120 AGFG2O95081 481 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms