RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 SLC16A12Q6ZSM3 486 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 PTAR1Q7Z6K3 402 aaPredicted RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 ZNF605Q86T29 641 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 METTL3Q86U44 580 aaKnown RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 NLRP8Q86W28 1048 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 ZSWIM9Q86XI8 627 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 LIX1LQ8IVB5 337 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 TMEM192Q8IY95 271 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 LINC00471Q8N535 108 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 DTWD1Q8N5C7 304 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 NATD1Q8N6N6 113 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 GDPD1Q8N9F7 314 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 TTC29Q8NA56 475 aaPredicted RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 OR52K2Q8NGK3 314 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 OR9I1Q8NGQ6 314 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 PROKR1Q8TCW9 393 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 CAPSLQ8WWF8 208 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 FIG4Q92562 907 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 TANKQ92844 425 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 TADA1Q96BN2 335 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 TESCQ96BS2 214 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 FUBP3Q96I24 572 aaKnown RBP eCLIP5.69□□□□□ -1.5
CHD4-206ENST00000536999 FCRL2Q96LA5 508 aaPredicted RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 ZNF583Q96ND8 569 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 PITX2Q99697 317 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 COQ7Q99807 217 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 MAPKAP1Q9BPZ7 522 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 SLC30A2Q9BRI3 323 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 TINF2Q9BSI4 451 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 YIPF2Q9BWQ6 316 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 CEP41Q9BYV8 373 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 SLIRPQ9GZT3 109 aaKnown RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 MINDY3Q9H8M7 445 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 MARCH7Q9H992 704 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 RDH14Q9HBH5 336 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 KRT84Q9NSB2 600 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 DDX28Q9NUL7 540 aaKnown RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 NLE1Q9NVX2 485 aaPredicted RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 TMEM248Q9NWD8 314 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 PIH1D1Q9NWS0 290 aaKnown RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 C1orf109Q9NX04 203 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 ING3Q9NXR8 418 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 CD274Q9NZQ7 290 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 COX16Q9P0S2 106 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 RABL2AQ9UBK7 228 aaPredicted RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 UBA2Q9UBT2 640 aaPredicted RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 TRPS1Q9UHF7 1281 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 KLHL21Q9UJP4 597 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 ADAM30Q9UKF2 790 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 NDRG4Q9ULP0 352 aaKnown RBP5.69□□□□□ -1.5
CHD4-206ENST00000536999 SNX6Q9UNH7 406 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 RABL2BQ9UNT1 228 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 RNF6Q9Y252 685 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 CORINQ9Y5Q5 1042 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 WDR87Q6ZQQ6 2873 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 DMXL1Q9Y485 3027 aa5.69□□□□□ -1.5
CHD4-206ENST00000536999 E2F8A0AVK6 867 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 OR2A25A4D2G3 310 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ARRDC5A6NEK1 342 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CCDC182A6NF36 153 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 METTL15A6NJ78 407 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 YJEFN3A6XGL0 299 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CLCA1A8K7I4 914 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 TTC34A8MYJ7 566 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 H7C0S8 307 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 KPNA5O15131 536 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 UGDHO60701 494 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 RAMP2O60895 175 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 SCN2BO60939 215 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 GUCY1B2O75343 617 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 SEC22BO75396 215 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ITGA10O75578 1167 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 LGI1O95970 557 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 THP07101 528 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 IQCF3P0C7M6 154 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ZNF865P0CJ78 1059 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 PIPP12273 146 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 MTHFD2P13995 350 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 PKMP14618 531 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 ZNF7P17097 686 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 NELFEP18615 380 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 CD247P20963 164 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 LPOP22079 712 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 PRPH2P23942 346 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 HRH2P25021 359 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 PSMA1P25786 263 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 CST5P28325 142 aaPredicted RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 MAPK8P45983 427 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ASMTP46597 345 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 HNMTP50135 292 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 RORCP51449 518 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 PLK1P53350 603 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 PNLIPRP1P54315 467 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 GP2P55259 537 aaKnown RBP5.68□□□□□ -1.5
CHD4-206ENST00000536999 CLDN8P56748 225 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 OR2B6P58173 313 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 SMIM11AP58511 58 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 CDC42P60953 191 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 UFM1P61960 85 aa5.68□□□□□ -1.5
CHD4-206ENST00000536999 ADAM17P78536 824 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms