RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 GRHL2Q6ISB3 625 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 NEK5Q6P3R8 708 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 TMEM220Q6QAJ8 160 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 MBOAT1Q6ZNC8 495 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 THOC6Q86W42 341 aaKnown RBP13.21□□□□□ -0.3
SMG6-203ENST00000536871 TERB1Q8NA31 727 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 OR56A3Q8NH54 315 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 NAT14Q8WUY8 206 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 SUSD6Q92537 303 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 GTF2H4Q92759 462 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 HBEGFQ99075 208 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 BDH2Q9BUT1 245 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 HDAC8Q9BY41 377 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 UGT2B28Q9BY64 529 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 DPEP2Q9H4A9 486 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 COQ10BQ9H8M1 238 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 GORASP2Q9H8Y8 452 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 ITM2CQ9NQX7 267 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 INTS7Q9NVH2 962 aaKnown RBP13.21□□□□□ -0.3
SMG6-203ENST00000536871 PCDHGA11Q9Y5H2 935 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 PLXNB3Q9ULL4 1909 aa13.21□□□□□ -0.3
SMG6-203ENST00000536871 A0A096LPI6 279 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 TCRBV5S2A0A599 114 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 HEPACAM2A8MVW5 462 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 ARHGEF33A8MVX0 844 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 H3BM21 787 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 NPC1O15118 1278 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 SCELO95171 688 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 CA3P07451 260 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 ANXA6P08133 673 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 CDH1P12830 882 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 ADRB3P13945 408 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 POLE2P56282 527 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 TXNL4AP83876 142 aaKnown RBP13.2□□□□□ -0.3
SMG6-203ENST00000536871 E2F2Q14209 437 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 FAM98BQ52LJ0 330 aaKnown RBP13.2□□□□□ -0.3
SMG6-203ENST00000536871 LRIF1Q5T3J3 769 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 FAM219BQ5XKK7 198 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 GLYATQ6IB77 296 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 AGTRAPQ6RW13 159 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 ERN2Q76MJ5 926 aaKnown RBP13.2□□□□□ -0.3
SMG6-203ENST00000536871 IFNEQ86WN2 208 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 C12orf40Q86WS4 652 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 TMEM132CQ8N3T6 1108 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 BEND7Q8N7W2 519 aaPredicted RBP13.2□□□□□ -0.3
SMG6-203ENST00000536871 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 NCSTNQ92542 709 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 PPP1R14BQ96C90 147 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 OR52E6Q96RD3 313 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 TMEM245Q9H330 911 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 ZNF696Q9H7X3 374 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 ZFP14Q9HCL3 533 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 TRIM39Q9HCM9 518 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 FARSBQ9NSD9 589 aaKnown RBP13.2□□□□□ -0.3
SMG6-203ENST00000536871 ZNHIT2Q9UHR6 403 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 RUVBL1Q9Y265 456 aaKnown RBP13.2□□□□□ -0.3
SMG6-203ENST00000536871 KCNE2Q9Y6J6 123 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 NOTCH4Q99466 2003 aa13.2□□□□□ -0.3
SMG6-203ENST00000536871 PRRT4C9JH25 899 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 LZTS3O60299 673 aaPredicted RBP13.19□□□□□ -0.3
SMG6-203ENST00000536871 MTX2O75431 263 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 TIPRLO75663 272 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 RECQL5O94762 991 aaPredicted RBP13.19□□□□□ -0.3
SMG6-203ENST00000536871 GGT1P19440 569 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 VIPR2P41587 438 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 GPR1P46091 355 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 ASMTP46597 345 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 TRPC1P48995 793 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 RPA4Q13156 261 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 PTGR1Q14914 329 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 GRIN2CQ14957 1233 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 ATP6AP1Q15904 470 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 TCEAL5Q5H9L2 206 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 TMC5Q6UXY8 1006 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 RBM23Q86U06 439 aaKnown RBP13.19□□□□□ -0.3
SMG6-203ENST00000536871 GALNT4Q8N4A0 578 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 OR2T12Q8NG77 320 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 FGF13Q92913 245 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 RSPRY1Q96DX4 576 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 EHD1Q9H4M9 534 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 LMCD1Q9NZU5 365 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 STOX2Q9P2F5 926 aaPredicted RBP13.19□□□□□ -0.3
SMG6-203ENST00000536871 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.19□□□□□ -0.3
SMG6-203ENST00000536871 CIDEBQ9UHD4 219 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 SMIM31A0A1B0GVY4 71 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 GSTA4O15217 222 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 LDLRP01130 860 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 ZCCHC18P0CG32 403 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 AMD1P17707 334 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 IL1RNP18510 177 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 EN2P19622 333 aaPredicted RBP13.19□□□□□ -0.3
SMG6-203ENST00000536871 CCT8P50990 548 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 DGKQP52824 942 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 CTSCP53634 463 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 PRKCQQ04759 706 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 CYP4F3Q08477 520 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 ZNF234Q14588 700 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 RUNDC3AQ59EK9 446 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 XKR6Q5GH73 641 aa13.19□□□□□ -0.3
SMG6-203ENST00000536871 PAGE2BQ5JRK9 111 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms