RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 ZPBPQ9BS86 351 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 H2AFJQ9BTM1 129 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 SLC12A9Q9BXP2 914 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 TRIM54Q9BYV2 358 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 PARVBQ9HBI1 364 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 ACTR10Q9NZ32 417 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 SEMA5BQ9P283 1151 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 FETUBQ9UGM5 382 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 ZNF180Q9UJW8 692 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 POMT2Q9UKY4 750 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 PLAGL1Q9UM63 463 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 ADAMTS20P59510 1910 aa13.09□□□□□ -0.31
RPAIN-205ENST00000536255 IGHV5-51A0A0C4DH38 117 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 POLR1CO15160 346 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-205ENST00000536255 FKBP9O95302 570 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 TSPAN12O95859 305 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 SYF2O95926 243 aaKnown RBP13.08□□□□□ -0.32
RPAIN-205ENST00000536255 ENO2P09104 434 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-205ENST00000536255 TPBGLP0DKB5 382 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 NELFEP18615 380 aaKnown RBP13.08□□□□□ -0.32
RPAIN-205ENST00000536255 CDH3P22223 829 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 PRDX3P30048 256 aaKnown RBP13.08□□□□□ -0.32
RPAIN-205ENST00000536255 ARL4DP49703 201 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 SERPINB8P50452 374 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 TMPRSS3P57727 454 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 GRB7Q14451 532 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 SLC29A2Q14542 456 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 ZNF460Q14592 562 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 ZKSCAN8Q15776 578 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-205ENST00000536255 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.08□□□□□ -0.32
RPAIN-205ENST00000536255 UBAP2Q5T6F2 1119 aaKnown RBP13.08□□□□□ -0.32
RPAIN-205ENST00000536255 MROH9Q5TGP6 573 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 CEACAM20Q6UY09 585 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 ADAMTSL2Q86TH1 951 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 DTX1Q86Y01 620 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 HMGCLL1Q8TB92 370 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 SLC41A2Q96JW4 573 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 CCDC138Q96M89 665 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 MAP3K3Q99759 626 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 CTRCQ99895 268 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 MENTQ9BUN1 341 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 DERL2Q9GZP9 239 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 PRORYQ9H606 182 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 PPCSQ9HAB8 311 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 APMAPQ9HDC9 416 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 C1GALT1Q9NS00 363 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 NOVA2Q9UNW9 492 aaKnown RBP13.08□□□□□ -0.32
RPAIN-205ENST00000536255 PCDHB11Q9Y5F2 797 aa13.08□□□□□ -0.32
RPAIN-205ENST00000536255 NBEAQ8NFP9 2946 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 ISM1B1AKI9 464 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 PHGDHO43175 533 aaKnown RBP13.07□□□□□ -0.32
RPAIN-205ENST00000536255 ZBTB11O95625 1053 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-205ENST00000536255 SLC26A3P40879 764 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 KPNA2P52292 529 aaKnown RBP13.07□□□□□ -0.32
RPAIN-205ENST00000536255 AP1S2P56377 157 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 ATP6V0D1P61421 351 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 CXADRP78310 365 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 SH3BP2P78314 561 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 FOXM1Q08050 763 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 CYP2A13Q16696 494 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 CCSMST1Q4G0I0 132 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 TAF1BQ53T94 588 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-205ENST00000536255 FBXO38Q6PIJ6 1188 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 SPESP1Q6UW49 350 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 TMEM207Q6UWW9 146 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 TBC1D1Q86TI0 1168 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-205ENST00000536255 RASGRP3Q8IV61 690 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 SYTL1Q8IYJ3 562 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 IL17FQ96PD4 163 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 OR6C1Q96RD1 312 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 CCNL2Q96S94 520 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-205ENST00000536255 PKP4Q99569 1192 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 NRTNQ99748 197 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 PARD6BQ9BYG5 372 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 CPNE5Q9HCH3 593 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 WDR70Q9NW82 654 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 CTNNAL1Q9UBT7 734 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 CIDEBQ9UHD4 219 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 TLK1Q9UKI8 766 aa13.07□□□□□ -0.32
RPAIN-205ENST00000536255 AHCTF1Q8WYP5 2266 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 ZFYVE26Q68DK2 2539 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 A0A087X1B8 175 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 WISP3O95389 354 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-205ENST00000536255 SLC16A8O95907 504 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 CCDC166P0CW27 439 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 ERGP11308 486 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 UGT2B7P16662 529 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 TYK2P29597 1187 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 OAS2P29728 719 aaKnown RBP13.06□□□□□ -0.32
RPAIN-205ENST00000536255 PGGT1BP53609 377 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 PNLIPRP1P54315 467 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 HSD11B2P80365 405 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 BMPR2Q13873 1038 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 IL11RAQ14626 422 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 NAA25Q14CX7 972 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 SLC5A12Q1EHB4 618 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 TMTC4Q5T4D3 741 aa13.06□□□□□ -0.32
RPAIN-205ENST00000536255 ADGRD1Q6QNK2 874 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms