RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 RBPJLQ9UBG7 517 aa17.79■□□□□ 0.44
SFSWAP-203ENST00000535236 SAGE2PA6NJ88 616 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 ERI3O43414 337 aaKnown RBP17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 GSTT2BP0CG30 244 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 CHRNB2P17787 502 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 SLC6A9P48067 706 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 ENPP2Q13822 863 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 GANABQ14697 944 aaKnown RBP17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 IQCKQ8N0W5 287 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 C1orf216Q8TAB5 229 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 LGALS13Q9UHV8 139 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 PEX12O00623 359 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 OR3A3P47888 321 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 OR3A2P47893 321 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 CLCNKAP51800 687 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 GPR68Q15743 365 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 ZNF776Q68DI1 518 aaPredicted RBP17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 POLR2J3Q9H1A7 115 aaKnown RBP17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 CRTAC1Q9NQ79 661 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 XPNPEP1Q9NQW7 623 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 CNTN3Q9P232 1028 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 PDE10AQ9Y233 779 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 HAS3O00219 553 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 NAPRTQ6XQN6 538 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 LINGO2Q7L985 606 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 SUSD3Q96L08 255 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 B3GAT2Q9NPZ5 323 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 SDHAF3Q9NRP4 125 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 VPS29Q9UBQ0 182 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 NEMP2A6NFY4 417 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 AKAP8O43823 692 aaKnown RBP17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 CCNKO75909 580 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 PGAM2P15259 253 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 GDF10P55107 478 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 ABCA11PQ4W5N1 156 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 NATD1Q8N6N6 113 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 PDPRQ8NCN5 879 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 KCTD13Q8WZ19 329 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 TOP1MTQ969P6 601 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 SLC39A3Q9BRY0 314 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 FEM1AQ9BSK4 669 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 SPATA7Q9P0W8 599 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 CFL2Q9Y281 166 aa17.78■□□□□ 0.44
SFSWAP-203ENST00000535236 E7ENX8 843 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 HLA-DQB2P05538 268 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 KLK3P07288 261 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 BTN3A2P78410 334 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 IDNKQ5T6J7 187 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 TMEM156Q8N614 296 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 CMTM7Q96FZ5 175 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 CCSER2Q9H7U1 834 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 P2RX2Q9UBL9 471 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 PEX16Q9Y5Y5 336 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 PRPS1L1P21108 318 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 AZGP1P25311 298 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 MAP3K8P41279 467 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 GBX2P52951 348 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 HERVK_113P63132 956 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 ZFP69Q49AA0 526 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 ARMCX6Q7L4S7 300 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 TDRPQ86YL5 185 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 NXPE1Q8N323 547 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 PYCR2Q96C36 320 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 ERVK-6Q9BXR3 956 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 FBXL12Q9NXK8 326 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 HYKKA2RU49 373 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 OR51F1A6NGY5 319 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 A8MU76 341 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 S100A6P06703 90 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 RAP2AP10114 183 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 HSD11B1P28845 292 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 ZNF280AP59817 542 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 ERVK-8P63133 956 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 CHAF1BQ13112 559 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 UAP1L1Q3KQV9 507 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 MLIPQ5VWP3 458 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 OR4K17Q8NGC6 315 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 OR5K1Q8NHB7 308 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 ZNF221Q9UK13 617 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 TLL2Q9Y6L7 1015 aa17.77■□□□□ 0.44
SFSWAP-203ENST00000535236 EME2A4GXA9 379 aaPredicted RBP17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 FOXO6A8MYZ6 492 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 NIPSNAP2O75323 286 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 TACSTD2P09758 323 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 GJA1P17302 382 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 PITPNAQ00169 270 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 TYSND1Q2T9J0 566 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 PDSS1Q5T2R2 415 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 SH3PXD2AQ5TCZ1 1133 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 SYPL2Q5VXT5 272 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 DRICH1Q6PGQ1 229 aaPredicted RBP17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 LRRC57Q8N9N7 239 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 PNLDC1Q8NA58 520 aaKnown RBP17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 PROKR2Q8NFJ6 384 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 PSKH2Q96QS6 385 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 TBX5Q99593 518 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 ELAC1Q9H777 363 aaKnown RBP17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 CDC7O00311 574 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 PCDHGA12O60330 932 aa17.77■□□□□ 0.43
SFSWAP-203ENST00000535236 CLEC3AO75596 197 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms