RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PRRT3Q5FWE3 981 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 PRAMEF14Q5SWL7 426 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 UGT2A3Q6UWM9 527 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 PDZD3Q86UT5 571 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 NUDCD3Q8IVD9 361 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 MYO1HQ8N1T3 1032 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 PLD6Q8N2A8 252 aaKnown RBP11.97□□□□□ -0.49
SCARB1-204ENST00000535005 ICA1LQ8NDH6 482 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 KCTD4Q8WVF5 259 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 NXNL1Q96CM4 212 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 CMTM5Q96DZ9 223 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 NUSAP1Q9BXS6 441 aaKnown RBP11.97□□□□□ -0.49
SCARB1-204ENST00000535005 TFB2MQ9H5Q4 396 aaKnown RBP11.97□□□□□ -0.49
SCARB1-204ENST00000535005 FAM8A1Q9UBU6 413 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 TBC1D29Q9UFV1 150 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 RAB26Q9ULW5 256 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 RUVBL2Q9Y230 463 aaKnown RBP11.97□□□□□ -0.49
SCARB1-204ENST00000535005 TTC36A6NLP5 189 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 LMO7DNF2Z398 122 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 GFYI3L273 518 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 SLC16A5O15375 505 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 AQP9O43315 295 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 BPGMP07738 259 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 AQP5P55064 265 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 C1orf61Q13536 156 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 CSHL1Q14406 222 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 ACAP2Q15057 778 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 UAP1L1Q3KQV9 507 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 OGFRL1Q5TC84 451 aaPredicted RBP11.97□□□□□ -0.49
SCARB1-204ENST00000535005 PIWIL4Q7Z3Z4 852 aaKnown RBP11.97□□□□□ -0.49
SCARB1-204ENST00000535005 ISCA2Q86U28 154 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 GKN2Q86XP6 184 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 ZNF548Q8NEK5 533 aaPredicted RBP11.97□□□□□ -0.49
SCARB1-204ENST00000535005 LMX1AQ8TE12 382 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 ASB11Q8WXH4 323 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 TSNARE1Q96NA8 513 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 OSGEPL1Q9H4B0 414 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 ZNF696Q9H7X3 374 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 CAAP1Q9H8G2 361 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 GALNT8Q9NY28 637 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 TAAR2Q9P1P5 351 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 PCDH15Q96QU1 1955 aa11.97□□□□□ -0.49
SCARB1-204ENST00000535005 CER1O95813 267 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 CELA2BP08218 269 aaPredicted RBP11.96□□□□□ -0.49
SCARB1-204ENST00000535005 SLC35G4P0C7Q5 338 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 ZNF806P0C7X5 589 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 ALOX15P16050 662 aaPredicted RBP11.96□□□□□ -0.49
SCARB1-204ENST00000535005 CPA2P48052 419 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 KPNA2P52292 529 aaKnown RBP11.96□□□□□ -0.49
SCARB1-204ENST00000535005 STX3Q13277 289 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 CYLC2Q14093 348 aaPredicted RBP11.96□□□□□ -0.49
SCARB1-204ENST00000535005 CHI3L2Q15782 390 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 ZFP1Q6P2D0 407 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 UNC5DQ6UXZ4 953 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 CDHR3Q6ZTQ4 885 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 KANSL1Q7Z3B3 1105 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 TAF8Q7Z7C8 310 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 RHEBL1Q8TAI7 183 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 KIAA1191Q96A73 305 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 RILPQ96NA2 401 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 PRDM8Q9NQV8 689 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 GMEB2Q9UKD1 530 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 WDR37Q9Y2I8 494 aa11.96□□□□□ -0.49
SCARB1-204ENST00000535005 VPS13AQ96RL7 3174 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 C15orf38-AP3S2A0A0A6YYH1 394 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 OR5K4A6NMS3 321 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 PDZK1P1A8MUH7 402 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 IFRD1O00458 451 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 YY2O15391 372 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ZSCAN9O15535 394 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ZBTB14O43829 449 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 LRP3O75074 770 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 PSIP1O75475 530 aaKnown RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 TNFAIP8O95379 198 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 C8GP07360 202 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 RBP1P09455 135 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 F3P13726 295 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 EPHA8P29322 1005 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 HALP42357 657 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 HPCAP84074 193 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ABRQ12979 859 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 SP140Q13342 867 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 CCNIQ14094 377 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 SFT2D3Q587I9 215 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 IYDQ6PHW0 289 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 ARPINQ7Z6K5 226 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 TRIM73Q86UV7 250 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 SPATA6LQ8N4H0 392 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 FBXO15Q8NCQ5 510 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 TRPC4APQ8TEL6 797 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 STON2Q8WXE9 905 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 TFGQ92734 400 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 PTERQ96BW5 349 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 FOPNLQ96NB1 174 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 INSM2Q96T92 566 aaPredicted RBP11.95□□□□□ -0.5
SCARB1-204ENST00000535005 SLC12A9Q9BXP2 914 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 GAREM1Q9H706 876 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 FSCN3Q9NQT6 498 aa11.95□□□□□ -0.5
SCARB1-204ENST00000535005 DNAAF2Q9NVR5 837 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms