RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 BDKRB1P46663 353 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 CLCN7P51798 805 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 NCF4Q15080 339 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 FAM69BQ5VUD6 431 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 ZNF470Q6ECI4 717 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 TCTN3Q6NUS6 607 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 ZNF549Q6P9A3 640 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 PTRH1Q86Y79 214 aaKnown RBP13.52□□□□□ -0.25
SF3B2-215ENST00000534307 GPR135Q8IZ08 494 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 C2orf73Q8N5S3 287 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-215ENST00000534307 GRK7Q8WTQ7 553 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 RAD51AP1Q96B01 352 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 SLC22A18Q96BI1 424 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 FAM136AQ96C01 138 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 RAB11FIP5Q9BXF6 653 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 TRIM55Q9BYV6 548 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 SNX7Q9UNH6 387 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 PLCL2Q9UPR0 1127 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 TP53TG5Q9Y2B4 290 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 KLHL20Q9Y2M5 609 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 KLK4Q9Y5K2 254 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 MED13Q9UHV7 2174 aa13.52□□□□□ -0.25
SF3B2-215ENST00000534307 PRRC2CQ9Y520 2896 aaKnown RBP13.52□□□□□ -0.25
SF3B2-215ENST00000534307 A0A1W2PPV9 198 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 USP27XA6NNY8 438 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 PFDN6O15212 129 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 KLF7O75840 302 aaPredicted RBP13.51□□□□□ -0.25
SF3B2-215ENST00000534307 DNAJB5O75953 348 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 USP1O94782 785 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 F7P08709 466 aaPredicted RBP13.51□□□□□ -0.25
SF3B2-215ENST00000534307 CBSLP0DN79 551 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 ERGP11308 486 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 PKMP14618 531 aaKnown RBP13.51□□□□□ -0.25
SF3B2-215ENST00000534307 CBSP35520 551 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 CCNFP41002 786 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 CYP2A13Q16696 494 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 LACTB2Q53H82 288 aaPredicted RBP13.51□□□□□ -0.25
SF3B2-215ENST00000534307 ACSBG2Q5FVE4 666 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.51□□□□□ -0.25
SF3B2-215ENST00000534307 CPZQ66K79 652 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 FCRL6Q6DN72 434 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 TLDC1Q6P9B6 456 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 CNSTQ6PJW8 725 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 DENND6AQ8IWF6 608 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 PPIL6Q8IXY8 311 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 ZNF655Q8N720 491 aaPredicted RBP13.51□□□□□ -0.25
SF3B2-215ENST00000534307 GIMAP7Q8NHV1 300 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 GSDMBQ8TAX9 411 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 PROKR1Q8TCW9 393 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 ZNF285Q96NJ3 590 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 SLC30A3Q99726 388 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 EPN3Q9H201 632 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 EURLQ9NYK6 297 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 KLHL42Q9P2K6 505 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 PCYOX1Q9UHG3 505 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 TLK1Q9UKI8 766 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 SLC39A10Q9ULF5 831 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 VPS9D1Q9Y2B5 631 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 MRFAP1Q9Y605 127 aa13.51□□□□□ -0.25
SF3B2-215ENST00000534307 ARHGEF33A8MVX0 844 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 MKRN2OSH3BPM6 223 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 PSIP1O75475 530 aaKnown RBP13.5□□□□□ -0.25
SF3B2-215ENST00000534307 FKBP9O95302 570 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 PDGFAP04085 211 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 TCP1P17987 556 aaKnown RBP13.5□□□□□ -0.25
SF3B2-215ENST00000534307 CHRM3P20309 590 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 NR1D1P20393 614 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 ITGAXP20702 1163 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 IVDP26440 423 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 PSMB5P28074 263 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 CASRP41180 1078 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 GRIA3P42263 894 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 SLC1A2P43004 574 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 PTGIRP43119 386 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 CTBP1Q13363 440 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 PTK6Q13882 451 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 LONRF1Q17RB8 773 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 TTC23LQ6PF05 361 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 MCATQ8IVS2 390 aaKnown RBP13.5□□□□□ -0.25
SF3B2-215ENST00000534307 ZBTB2Q8N680 514 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 OR2A1Q8NGT9 310 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 SKA2Q8WVK7 121 aaPredicted RBP13.5□□□□□ -0.25
SF3B2-215ENST00000534307 N4BP2L2Q92802 583 aaPredicted RBP13.5□□□□□ -0.25
SF3B2-215ENST00000534307 KCNJ9Q92806 393 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 PSMG3-AS1Q96PY0 264 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 DHRS4Q9BTZ2 278 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 DDX47Q9H0S4 455 aaKnown RBP13.5□□□□□ -0.25
SF3B2-215ENST00000534307 MLXIPLQ9NP71 852 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 SPATA7Q9P0W8 599 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 DHCR7Q9UBM7 475 aaKnown RBP13.5□□□□□ -0.25
SF3B2-215ENST00000534307 ANAPC2Q9UJX6 822 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 SRPK3Q9UPE1 567 aa13.5□□□□□ -0.25
SF3B2-215ENST00000534307 TARM1B6A8C7 271 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 C9J4A7 227 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 MYO1CO00159 1063 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 CTSVO60911 334 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 CEACAM4O75871 244 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 AGXTP21549 392 aa13.49□□□□□ -0.25
SF3B2-215ENST00000534307 FOXK1P85037 733 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms