RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 TCRBV7S2A1N4TA0A589 114 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 PCP4L1A6NKN8 68 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 A8MUI8 341 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 H3BNX3 289 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 CCL22O00626 93 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 SUV39H1O43463 412 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 HBQ1P09105 142 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 JUNDP17535 347 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 PTX3P26022 381 aaPredicted RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 CDC42P60953 191 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 SRP54P61011 504 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 TUBA4AP68366 448 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 FAM189BP81408 668 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 PRKD1Q15139 912 aaPredicted RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 ANKRD22Q5VYY1 191 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 SCIMPQ6UWF3 145 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 UTS2BQ765I0 119 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 FAM220AQ7Z4H9 259 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 COMMD2Q86X83 199 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 UBR7Q8N806 425 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 ZMIZ2Q8NF64 920 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 LMO3Q8TAP4 145 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 PHF10Q8WUB8 498 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 TRIB3Q96RU7 358 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 AGAP2Q99490 1192 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 SDHAF3Q9NRP4 125 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 PTTG2Q9NZH5 202 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 SAMD4AQ9UPU9 718 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 H7C0S8 307 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 CCNKO75909 580 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 HNRNPA2B1P22626 353 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 MPIP34949 423 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 NTHL1P78549 312 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 TNK2Q07912 1038 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 TMEM115Q12893 351 aaPredicted RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 SEMA3AQ14563 771 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 TMEM240Q5SV17 173 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 PIK3C3Q8NEB9 887 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 EXOSC8Q96B26 276 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 BTBD9Q96Q07 612 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 CLSTN3Q9BQT9 956 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 OSBPL7Q9BZF2 842 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 GIN1Q9NXP7 522 aa11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 RBMX2Q9Y388 322 aaKnown RBP11.02□□□□□ -0.65
AMBRA1-211ENST00000533727 A0A0J9YYE9 177 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PDPK1O15530 556 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 CSNK2A2P19784 350 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 KHKP50053 298 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 DSC1Q08554 894 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 EIPR1Q53HC9 387 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 SPIN4Q56A73 249 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 GCNT6Q5T4J0 391 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 SLC29A4Q7RTT9 530 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 LRRC17Q8N6Y2 441 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 FAM98AQ8NCA5 519 aaKnown RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 GSTCDQ8NEC7 633 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 OR9A1PQ8NGU1 263 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 NACC2Q96BF6 587 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 CITED4Q96RK1 184 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 S100A13Q99584 98 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 ZBP1Q9H171 429 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 LGALS13Q9UHV8 139 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 KCNK6Q9Y257 313 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 GSTK1Q9Y2Q3 226 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 MEIS3P2A8K0S8 358 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PRAMEF26H0Y7S4 382 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 DCLK1O15075 740 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 STX11O75558 287 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 HLA-DQA2P01906 255 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 ZNF8P17098 575 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 TSPAN8P19075 237 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PTGIRP43119 386 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 RAB15P59190 212 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PUDPQ08623 228 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 ZFP69Q49AA0 526 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 LYSMD4Q5XG99 296 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 TMCO2Q7Z6W1 182 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 RBM12BQ8IXT5 1001 aaKnown RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 FBXO15Q8NCQ5 510 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 OR2T34Q8NGX1 318 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 KCNJ9Q92806 393 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 ISG20Q96AZ6 181 aaKnown RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 IMP4Q96G21 291 aaKnown RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 GAL3ST4Q96RP7 486 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PACSIN3Q9UKS6 424 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 H3BNC9 293 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 TLX3O43711 291 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 LRATO95237 230 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PAK4O96013 591 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 TSPAN19P0C672 248 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 FEN1P39748 380 aaKnown RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PIK3CBP42338 1070 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 STC1P52823 247 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 ZIK1Q3SY52 487 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 Q6ZVL8 140 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 CLNKQ7Z7G1 428 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 DEPDC4Q8N2C3 294 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 CPSF7Q8N684 471 aaKnown RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 FAM47BQ8NA70 645 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 TMEM145Q8NBT3 493 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms