RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 TNKS2Q9H2K2 1166 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 RC3H2Q9HBD1 1191 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 C11orf16Q9NQ32 467 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 DUS2Q9NX74 493 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 Q9Y3F1 56 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 RNASEH2AO75792 299 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CRYZL1O95825 349 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ITIH1P19827 911 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ATP5A1P25705 553 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ACSL1P33121 698 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 MPIP34949 423 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 DGKGP49619 791 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 RHDQ02161 417 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 USF2Q15853 346 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 AKIRIN2Q53H80 203 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 C10orf62Q5T681 223 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 FAM122CQ6P4D5 195 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZC3HC1Q86WB0 502 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ELMOD2Q8IZ81 293 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 PPP1R13LQ8WUF5 828 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF516Q92618 1163 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 FATE1Q969F0 183 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CDKN2AIPNLQ96HQ2 116 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 KCTD7Q96MP8 289 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 POLR2J2Q9GZM3 115 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 TLE6Q9H808 572 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 AKTIPQ9H8T0 292 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 TCF7L1Q9HCS4 588 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 MKKSQ9NPJ1 570 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 GDAP2Q9NXN4 497 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 P2RX2Q9UBL9 471 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZSCAN5BA6NJL1 495 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ANXA2P2A6NMY6 339 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CCL22O00626 93 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 MUSKO15146 869 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 AKAP8O43823 692 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 PCCBP05166 539 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 HLA-DQB2P05538 268 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ANXA2P07355 339 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 TACSTD2P09758 323 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CD36P16671 472 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 IL7RP16871 459 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 DDX6P26196 483 aaKnown RBP eCLIP6.86□□□□□ -1.311e-7■■□□□ 13.6
CTNND1-236ENST00000533667 IL1R2P27930 398 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CCR8P51685 355 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 DNAJB13P59910 316 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ERVK-21P61565 698 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SLC25A11Q02978 314 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 TARDBPQ13148 414 aaKnown RBP eCLIP6.86□□□□□ -1.311e-8■■■■□ 21.9
CTNND1-236ENST00000533667 OR2T5Q6IEZ7 315 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 PSRC1Q6PGN9 363 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 TAF8Q7Z7C8 310 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SPARTQ8N0X7 666 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 COX18Q8N8Q8 333 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 TMIEQ8NEW7 156 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 OR2T29Q8NH02 315 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SLC22A8Q8TCC7 542 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 AURKBQ96GD4 344 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CYP2S1Q96SQ9 504 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZSCAN5AQ9BUG6 496 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 DERL2Q9GZP9 239 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CST11Q9H112 138 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 RETREG1Q9H6L5 497 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CUEDC1Q9NWM3 386 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 MGAT4AQ9UM21 535 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 MEMO1Q9Y316 297 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 DAPL1A0PJW8 107 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 EME2A4GXA9 379 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ACOX3O15254 700 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ECI2O75521 394 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 BCAS2O75934 225 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 PGLSO95336 258 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CSNK2A2P19784 350 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 KCNA5P22460 613 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CPN2P22792 545 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 GBX2P52951 348 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 IRF9Q00978 393 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SLC10A7Q0GE19 358 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CBLBQ13191 982 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SP140Q13342 867 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CDCA2Q69YH5 1023 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 BRAT1Q6PJG6 821 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 PAQR3Q6TCH7 311 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ERMP1Q7Z2K6 904 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 AMZ2Q86W34 360 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZC3H3Q8IXZ2 948 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 DCBLD1Q8N8Z6 715 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SPERTQ8NA61 448 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 FAM156AQ8NDB6 213 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZMIZ2Q8NF64 920 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 CCDC107Q8WV48 283 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZUFSPQ96AP4 578 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SUSD3Q96L08 255 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 LGR4Q9BXB1 951 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ITPAQ9BY32 194 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ZBTB26Q9HCK0 441 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 ACSS2Q9NR19 701 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 FAM120CQ9NX05 1096 aaKnown RBP6.86□□□□□ -1.31
CTNND1-236ENST00000533667 TVP23BQ9NYZ1 205 aa6.86□□□□□ -1.31
CTNND1-236ENST00000533667 SEC14L4Q9UDX3 406 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms