RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ATP5DP30049 168 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 CBSP35520 551 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 HSD17B3P37058 310 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 SERPINB9P50453 376 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 KPNA2P52292 529 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 PGGT1BP53609 377 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 IL2P60568 153 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 SH3BP2P78314 561 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 IFFO1Q0D2I5 559 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 ZNF460Q14592 562 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 TIPARPQ7Z3E1 657 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 AMIGO1Q86WK6 493 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 PPP1R3BQ86XI6 285 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 MYO1HQ8N1T3 1032 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 ESX1Q8N693 406 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 OR5AR1Q8NGP9 310 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 OR8K5Q8NH50 307 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 OR5K2Q8NHB8 316 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 SLC44A1Q8WWI5 657 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 JPH3Q8WXH2 748 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 SLC39A7Q92504 469 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 CAVIN3Q969G5 261 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 OR6C1Q96RD1 312 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 GPR22Q99680 433 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 PITPNM3Q9BZ71 974 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 SYTL2Q9HCH5 934 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 RUVBL2Q9Y230 463 aaKnown RBP12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 MED16Q9Y2X0 877 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 PCDHGA4Q9Y5G9 962 aa12.53□□□□□ -0.4
TRAPPC4-212ENST00000533058 PABPN1LA6NDY0 278 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 BTN3A3O00478 584 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 PHGDHO43175 533 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 KDM1AO60341 852 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 KRT38O76015 456 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 MT-ND3P03897 115 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 FOLR1P15328 257 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 POLR2CP19387 275 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 PRDX3P30048 256 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 SHMT2P34897 504 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 BDKRB1P46663 353 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 TIAL1Q01085 375 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 CRTC2Q53ET0 693 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 TMTC4Q5T4D3 741 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 LGSNQ5TDP6 509 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 LRRC8EQ6NSJ5 796 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 UNC5DQ6UXZ4 953 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 PIWIL4Q7Z3Z4 852 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 VASH2Q86V25 355 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 ADGRF3Q8IZF5 1079 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 NKAPQ8N5F7 415 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 EEF1AKMT1Q8WVE0 214 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 SLC45A3Q96JT2 553 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 SLC12A9Q9BXP2 914 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 GPAMQ9HCL2 828 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 OR6C2Q9NZP2 312 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 TLK1Q9UKI8 766 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 RARRES3Q9UL19 164 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 NFS1Q9Y697 457 aa12.52□□□□□ -0.41
TRAPPC4-212ENST00000533058 LOC400499M0QZD8 3231 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 C2orf74A8MZ97 194 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 EIF3FO00303 357 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 BTN3A1O00481 513 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 SYF2O95926 243 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 CATP04040 527 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 SHBGP04278 402 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 MPC1LP0DKB6 136 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 LIFP15018 202 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 WT1P19544 449 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 CD9P21926 228 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 CNTFP26441 200 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 CRABP2P29373 138 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 CCNFP41002 786 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 STAT5AP42229 794 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 ARL4DP49703 201 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 SERPINB8P50452 374 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 RAB10P61026 200 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 TUBB3Q13509 450 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 GBX1Q14549 363 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 C6orf15Q6UXA7 325 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 NEK10Q6ZWH5 1172 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 CEP97Q8IW35 865 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 DCUN1D3Q8IWE4 304 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 MAGEC3Q8TD91 643 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 DCAKDQ8WVC6 231 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 KIAA1143Q96AT1 154 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 MCMBPQ9BTE3 642 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 ULBP3Q9BZM4 244 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 FAM117AQ9C073 453 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 CHRNA10Q9GZZ6 450 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 EPB41L4BQ9H329 900 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 POPDC3Q9HBV1 291 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 FGF21Q9NSA1 209 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 CIDEBQ9UHD4 219 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 PLAGL1Q9UM63 463 aa12.51□□□□□ -0.41
TRAPPC4-212ENST00000533058 LOC101059948A0A1B0GTJ6 334 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 TLDC2A0PJX2 215 aa12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 EIF4E1BA6NMX2 242 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-212ENST00000533058 TRIM49D1C9J1S8 452 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms