RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CLMPQ9H6B4 373 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 PLAC1Q9HBJ0 212 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 EURLQ9NYK6 297 aa17.11■□□□□ 0.33
SMG1-203ENST00000532700 FAM237BA0A1B0GVD1 139 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 MATN4O95460 622 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 OGNP20774 298 aaKnown RBP17.1■□□□□ 0.33
SMG1-203ENST00000532700 SLC1A2P43004 574 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 CSRP3P50461 194 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 CCL11P51671 97 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 CLCN7P51798 805 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 MPP1Q00013 466 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 CUL1Q13616 776 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 MSS51Q4VC12 460 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 RNASEH2BQ5TBB1 312 aaKnown RBP17.1■□□□□ 0.33
SMG1-203ENST00000532700 FRMPD2BQ6IN97 320 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 MRNIPQ6NTE8 343 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 ASB18Q6ZVZ8 466 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 MCUQ8NE86 351 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 TRIM44Q96DX7 344 aaPredicted RBP17.1■□□□□ 0.33
SMG1-203ENST00000532700 MIPEPQ99797 713 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 MESP1Q9BRJ9 268 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 DDX47Q9H0S4 455 aaKnown RBP17.1■□□□□ 0.33
SMG1-203ENST00000532700 ING2Q9H160 280 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 STOX2Q9P2F5 926 aaPredicted RBP17.1■□□□□ 0.33
SMG1-203ENST00000532700 PLCL2Q9UPR0 1127 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 SEC16AO15027 2179 aa17.1■□□□□ 0.33
SMG1-203ENST00000532700 PCM1Q15154 2024 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 MKRN2OSH3BPM6 223 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 AP3B1O00203 1094 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 UMODP07911 640 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 PKMP14618 531 aaKnown RBP17.09■□□□□ 0.33
SMG1-203ENST00000532700 CASQ1P31415 396 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 MLLT10P55197 1068 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 ETF1P62495 437 aaKnown RBP17.09■□□□□ 0.33
SMG1-203ENST00000532700 SNRPNP63162 240 aaKnown RBP17.09■□□□□ 0.33
SMG1-203ENST00000532700 TIAL1Q01085 375 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMG1-203ENST00000532700 KCNC4Q03721 635 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 KLHL38Q2WGJ6 581 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 MLIPQ5VWP3 458 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 FIGLAQ6QHK4 219 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 COX15Q7KZN9 410 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 MCATQ8IVS2 390 aaKnown RBP17.09■□□□□ 0.33
SMG1-203ENST00000532700 IGDCC3Q8IVU1 814 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 GPR135Q8IZ08 494 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 C17orf53Q8N3J3 647 aaPredicted RBP17.09■□□□□ 0.33
SMG1-203ENST00000532700 METTL27Q8N6F8 245 aaPredicted RBP17.09■□□□□ 0.33
SMG1-203ENST00000532700 OR2A1Q8NGT9 310 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 GRK7Q8WTQ7 553 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 THAP4Q8WY91 577 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 PWWP2AQ96N64 755 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 NUDT9Q9BW91 350 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 SLC7A5P2Q9GIP4 190 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 MLXIPLQ9NP71 852 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 SLC6A20Q9NP91 592 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 SLC17A6Q9P2U8 582 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 RNF14Q9UBS8 474 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 SLC39A10Q9ULF5 831 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 PLAAQ9Y263 795 aa17.09■□□□□ 0.33
SMG1-203ENST00000532700 LOC105369274A0A096LPK9 316 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 LOC102723532A0A0G2JNH3 316 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 SDR42E2A6NKP2 422 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 F8W8V4 182 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 ESR1P03372 595 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 ERGP11308 486 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 MLNP12872 115 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 OTX2P32243 289 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 PAFAH1B1P43034 410 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 FNTAP49354 379 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 PGGT1BP53609 377 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 ADARP55265 1226 aaKnown RBP17.08■□□□□ 0.32
SMG1-203ENST00000532700 RAPSNQ13702 412 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 SF1Q15637 639 aaKnown RBP17.08■□□□□ 0.32
SMG1-203ENST00000532700 NADK2Q4G0N4 442 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 MRPL14Q6P1L8 145 aaKnown RBP17.08■□□□□ 0.32
SMG1-203ENST00000532700 SUSD1Q6UWL2 747 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 SDCCAG8Q86SQ7 713 aaPredicted RBP17.08■□□□□ 0.32
SMG1-203ENST00000532700 OR4N4Q8N0Y3 316 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 PPFIBP2Q8ND30 876 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 OR2L3Q8NG85 312 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 N4BP2L2Q92802 583 aaPredicted RBP17.08■□□□□ 0.32
SMG1-203ENST00000532700 RAD51AP1Q96B01 352 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 CAPZA3Q96KX2 299 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 WDR83Q9BRX9 315 aaKnown RBP17.08■□□□□ 0.32
SMG1-203ENST00000532700 ACAT2Q9BWD1 397 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 XAB2Q9HCS7 855 aaKnown RBP17.08■□□□□ 0.32
SMG1-203ENST00000532700 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.08■□□□□ 0.32
SMG1-203ENST00000532700 ANAPC2Q9UJX6 822 aa17.08■□□□□ 0.32
SMG1-203ENST00000532700 IGKV1-8A0A0C4DH67 115 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 MAP3K7O43318 606 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 ALOX12BO75342 701 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 PSIP1O75475 530 aaKnown RBP17.07■□□□□ 0.32
SMG1-203ENST00000532700 CEACAM4O75871 244 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 USP1O94782 785 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 HAUS5O94927 633 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 RPN2P04844 631 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 CHRM3P20309 590 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 IVDP26440 423 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 FOXK1P85037 733 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 KLRB1Q12918 225 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 CYP2A13Q16696 494 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms