RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 AP2A2O94973 939 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 CYP4B1P13584 511 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 ARSAP15289 507 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 FAM92BQ6ZTR7 304 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 PGAM4Q8N0Y7 254 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 FSTL5Q8N475 847 aaPredicted RBP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 IGSF8Q969P0 613 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 RGMAQ96B86 450 aa11.05□□□□□ -0.64
PTPRK-221ENST00000532331 CLK4Q9HAZ1 481 aaKnown RBP11.05□□□□□ -0.64
PTPRK-221ENST00000532331 ERI3O43414 337 aaKnown RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 PROZP22891 400 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 PRDX6P30041 224 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 HOXD13P35453 343 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 ETV3P41162 512 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 RPL5P46777 297 aaKnown RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 MARCH8Q5T0T0 291 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 OAFQ86UD1 273 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 TRIM74Q86UV6 250 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 CNOT6Q9ULM6 557 aaKnown RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 SSR3Q9UNL2 185 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 SIT1Q9Y3P8 196 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 HEXBP07686 556 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 THEGLP0DJG4 465 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 MTX3Q5HYI7 312 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 IKBIPQ70UQ0 350 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 KRT74Q7RTS7 529 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 C11orf65Q8NCR3 313 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 FIBINQ8TAL6 211 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 GATA5Q9BWX5 397 aaPredicted RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 EBPLQ9BY08 206 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 ELL3Q9HB65 397 aaPredicted RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 FETUBQ9UGM5 382 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 CFL2Q9Y281 166 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 A0A0G2JN53 185 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 LINC01553A4QN01 128 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 DCLK1O15075 740 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 HMGB3O15347 200 aaKnown RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 PDPK1O15530 556 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 KERAO60938 352 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 FABP3P05413 133 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 GIMD1P0DJR0 217 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 TAS2R39P59534 338 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 BTN3A2P78410 334 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 FAM214AQ32MH5 1076 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 REP15Q6BDI9 236 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 KCT2Q8NC54 265 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 LINC00597Q9H2U6 94 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 C12orf65Q9H3J6 166 aaKnown RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 LDAHQ9H6V9 325 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 SLCO3A1Q9UIG8 710 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 RUVBL1Q9Y265 456 aaKnown RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 BTBD3Q9Y2F9 522 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 U3KQV3 271 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 TMEM265A0A087WTH1 108 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 KIAA0355O15063 1070 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 ASGR2P07307 311 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 DBTP11182 482 aaKnown RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 MPIP34949 423 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 CTSKP43235 329 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 RHAGQ02094 409 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 TDGQ13569 410 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 DDI2Q5TDH0 399 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 TAS1R1Q7RTX1 841 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 RASSF5Q8WWW0 418 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.04□□□□□ -0.645e-8■■□□□ 12
PTPRK-221ENST00000532331 TFB2MQ9H5Q4 396 aaKnown RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 IL21RQ9HBE5 538 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 USP29Q9HBJ7 922 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 DIABLOQ9NR28 239 aa11.04□□□□□ -0.64
PTPRK-221ENST00000532331 MRPS7Q9Y2R9 242 aaKnown RBP11.04□□□□□ -0.64
PTPRK-221ENST00000532331 SEC24AO95486 1093 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 MSX2P35548 267 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PXNP49023 591 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 LIPEQ05469 1076 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 ZNF460Q14592 562 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 ZNF542PQ5EBM4 170 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 VWA5B1Q5TIE3 1220 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 LRRC69Q6ZNQ3 347 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 GJD3Q8N144 294 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 TTC9BQ8N6N2 239 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 GPR151Q8TDV0 419 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 ZBED6CLQ96FA7 236 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 CDH22Q9UJ99 828 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PADI2Q9Y2J8 665 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 XKRYO14609 159 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 SNPHO15079 494 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 REM1O75628 298 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 IFNW1P05000 195 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 IL12RB1P42701 662 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 MED22Q15528 200 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 ZBTB6Q15916 424 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 TOR1AIP1Q5JTV8 583 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 ANKRD54Q6NXT1 300 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 TRAM1L1Q8N609 369 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PLA2G15Q8NCC3 412 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 RBM15BQ8NDT2 890 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 AP3S1Q92572 193 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 SLC17A9Q9BYT1 436 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms