RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 RPH3AQ9Y2J0 694 aaPredicted RBP4.17□□□□□ -1.74
USP47-211ENST00000531513 ATP6V0A2Q9Y487 856 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 PCDHAC2Q9Y5I4 1007 aa4.17□□□□□ -1.74
USP47-211ENST00000531513 A0A1W2PPK0 400 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 SLC9B1P1A6NJY1 282 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 C15orf62A8K5M9 175 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 FLRT2O43155 660 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 TTI1O43156 1089 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 TXNL1O43396 289 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 GRID2O43424 1007 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 RGS14O43566 566 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 BUD23O43709 281 aaKnown RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 PRAF2O60831 178 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 WISP2O76076 250 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 REC8O95072 547 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 BMP10O95393 424 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 ANKRD34CP0C6C1 535 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 SMIM18P0DKX4 95 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 MYL6BP14649 208 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 EPORP19235 508 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 S1PR1P21453 382 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 CORO1AP31146 461 aaKnown RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 SERPINB6P35237 376 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 PTGER4P35408 488 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 CDX1P47902 265 aaPredicted RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 AMTP48728 403 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 SERPINH1P50454 418 aaKnown RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 UCP2P55851 309 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 GSDMDP57764 484 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 DSCR9P59020 149 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 MAT1AQ00266 395 aaKnown RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 GPS2Q13227 327 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 OASLQ15646 514 aaKnown RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 CTU2Q2VPK5 515 aaKnown RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 LACTB2Q53H82 288 aaPredicted RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 SYT14P1Q58G82 188 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 KLC3Q6P597 504 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 NLRP14Q86W24 1093 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 FAM114A1Q8IWE2 563 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 DAZLQ92904 295 aaKnown RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 PIGTQ969N2 578 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 DHX58Q96C10 678 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 TSGA13Q96PP4 275 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 MYADMQ96S97 322 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 RUFY1Q96T51 708 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 SLC25A33Q9BSK2 321 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 ABCG4Q9H172 646 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 HSD3B7Q9H2F3 369 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 LRMDAQ9H2I8 198 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 RNPEPL1Q9HAU8 725 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 SERINC1Q9NRX5 453 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 PNPLA3Q9NST1 481 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 TCP11L1Q9NUJ3 509 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 MIOSQ9NXC5 875 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 C1RLQ9NZP8 487 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 TXNDC16Q9P2K2 825 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 B3GAT1Q9P2W7 334 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 LRWD1Q9UFC0 647 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 BLOC1S6Q9UL45 172 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 PIN4Q9Y237 131 aaKnown RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 ITM2BQ9Y287 266 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 TDRKHQ9Y2W6 561 aaKnown RBP4.16□□□□□ -1.74
USP47-211ENST00000531513 SNX9Q9Y5X1 595 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 TEX264Q9Y6I9 313 aa4.16□□□□□ -1.74
USP47-211ENST00000531513 MED19A0JLT2 244 aaPredicted RBP4.15□□□□□ -1.75
USP47-211ENST00000531513 HYKKA2RU49 373 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 MAGEA13PA6NCF6 341 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 OR5K3A6NET4 321 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 ANKRD66B4E2M5 251 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 CPLX1O14810 134 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 CTDSPLO15194 276 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 RFPL2O75678 378 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 RAD51DO75771 328 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 LETM1O95202 739 aaPredicted RBP4.15□□□□□ -1.75
USP47-211ENST00000531513 WDPCPO95876 746 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 PLGP00747 810 aaPredicted RBP4.15□□□□□ -1.75
USP47-211ENST00000531513 C9P02748 559 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 C21orf33P30042 268 aaPredicted RBP4.15□□□□□ -1.75
USP47-211ENST00000531513 SSTR2P30874 369 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 PSMC4P43686 418 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 KCNJ4P48050 445 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 MMP15P51511 669 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 ZNF131P52739 623 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 ROR2Q01974 943 aaKnown RBP4.15□□□□□ -1.75
USP47-211ENST00000531513 FOLH1Q04609 750 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 VEZF1Q14119 521 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 PDK1Q15118 436 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 NPTX1Q15818 432 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 MCMDC2Q4G0Z9 681 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 CCNI2Q6ZMN8 369 aaPredicted RBP4.15□□□□□ -1.75
USP47-211ENST00000531513 MIER3Q7Z3K6 550 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 PRSS42Q7Z5A4 293 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 EXOC3L1Q86VI1 746 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 ARHGAP24Q8N264 748 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 GBGT1Q8N5D6 347 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 PRR26Q8N8Z3 221 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 MRPL43Q8N983 215 aaKnown RBP4.15□□□□□ -1.75
USP47-211ENST00000531513 PPFIBP2Q8ND30 876 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 ANKRD20A12PQ8NF67 263 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 NEK11Q8NG66 645 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms