RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 RAB42Q8N4Z0 105 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 AGBL5Q8NDL9 886 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 RCBTB1Q8NDN9 531 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 GATA6Q92908 595 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 KIAA1191Q96A73 305 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 SLC22A18Q96BI1 424 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 MTBPQ96DY7 904 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 MRRFQ96E11 262 aaKnown RBP13.98□□□□□ -0.17
CPSF1-206ENST00000531480 IL17FQ96PD4 163 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 MAP3K3Q99759 626 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 CMKLR1Q99788 373 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 POLR1BQ9H9Y6 1135 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 IGSF5Q9NSI5 407 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 PSMC3IPQ9P2W1 217 aaPredicted RBP13.98□□□□□ -0.17
CPSF1-206ENST00000531480 DKK4Q9UBT3 224 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 LNPEPQ9UIQ6 1025 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 BTRCQ9Y297 605 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 ACOT9Q9Y305 439 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 HEATR5BQ9P2D3 2071 aa13.98□□□□□ -0.17
CPSF1-206ENST00000531480 ZNF839A8K0R7 811 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 B4E171 279 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 PLD2O14939 933 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 LTA4HP09960 611 aaKnown RBP13.97□□□□□ -0.17
CPSF1-206ENST00000531480 TSPAN7P41732 249 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 PNLIPRP1P54315 467 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 IFFO1Q0D2I5 559 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 FASTKQ14296 549 aaKnown RBP13.97□□□□□ -0.17
CPSF1-206ENST00000531480 LGSNQ5TDP6 509 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 CACHD1Q5VU97 1274 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 ARMC6Q6NXE6 501 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 FAM92BQ6ZTR7 304 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 CLEC14AQ86T13 490 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 D2HGDHQ8N465 521 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 LMNTD1Q8N9Z9 388 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 OR2A1Q8NGT9 310 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 SMPDL3AQ92484 453 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 PTERQ96BW5 349 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 FBXL8Q96CD0 374 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 PPM1MQ96MI6 270 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 GPR78Q96P69 363 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 STMN4Q9H169 189 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-206ENST00000531480 STOX2Q9P2F5 926 aaPredicted RBP13.97□□□□□ -0.17
CPSF1-206ENST00000531480 CIDEBQ9UHD4 219 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 LOXL2Q9Y4K0 774 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 OARD1Q9Y530 152 aa13.97□□□□□ -0.17
CPSF1-206ENST00000531480 A0A096LPK6 155 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 GSAPA4D1B5 854 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 NPEPPSL1A6NEC2 478 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 TRABD2BA6NFA1 517 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 TRIM49D1C9J1S8 452 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 RFPL1O75677 317 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 KLHL2O95198 593 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 ZBTB11O95625 1053 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-206ENST00000531480 FGF3P11487 239 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-206ENST00000531480 COL6A2P12110 1019 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 TYK2P29597 1187 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 OAS2P29728 719 aaKnown RBP13.96□□□□□ -0.17
CPSF1-206ENST00000531480 CSHL1Q14406 222 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 CASP8Q14790 479 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 TSNQ15631 228 aaKnown RBP13.96□□□□□ -0.17
CPSF1-206ENST00000531480 TBC1D1Q86TI0 1168 aaPredicted RBP13.96□□□□□ -0.17
CPSF1-206ENST00000531480 ISCA2Q86U28 154 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 KLHDC8AQ8IYD2 350 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 RHEBL1Q8TAI7 183 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 SLC46A1Q96NT5 459 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 TRAPPC9Q96Q05 1148 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 TMEM109Q9BVC6 243 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 SGPP1Q9BX95 441 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 NMRAL1Q9HBL8 299 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 ASCL3Q9NQ33 180 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 FBXO8Q9NRD0 319 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 ENAMQ9NRM1 1142 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 CTNNAL1Q9UBT7 734 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 SATB2Q9UPW6 733 aa13.96□□□□□ -0.17
CPSF1-206ENST00000531480 IGF2RP11717 2491 aa13.96□□□□□ -0.18
CPSF1-206ENST00000531480 A0A0J9YY10 115 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 IQANK1A0A1B0GTG1 560 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 PMS2P1A4D2B8 440 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 CDRT15L2A8MXV6 281 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 CDH16O75309 829 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 MPOP05164 745 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 HIST1H2AGP0C0S8 130 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-206ENST00000531480 HIST1H2ADP20671 130 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 CSTF2P33240 577 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPSF1-206ENST00000531480 GMPRP36959 345 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 KCNC1P48547 511 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 HSD11B2P80365 405 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 IRF9Q00978 393 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 MC2RQ01718 297 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 ACAP2Q15057 778 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 TGFBIQ15582 683 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 OR4D1Q15615 310 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 TAF1BQ53T94 588 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-206ENST00000531480 AGTRAPQ6RW13 159 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 LRIG3Q6UXM1 1119 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 MBOAT1Q6ZNC8 495 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 SH2D5Q6ZV89 423 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 RAPH1Q70E73 1250 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 LCA5Q86VQ0 697 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 LSMEM2Q8N112 164 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms