RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ESPL1Q14674 2120 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 MYO9AB2RTY4 2548 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 NBPF19A0A087WUL8 3843 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 TCRBV7S2A1N4TA0A589 114 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 ERI2A8K979 691 aaKnown RBP15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 IQCF5A8MTL0 148 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 DSCR3O14972 297 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 ERVK-10P10266 1014 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 CD9P21926 228 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 FDFT1P37268 417 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 BDKRB1P46663 353 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 VSX2P58304 361 aaPredicted RBP15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 CDC16Q13042 620 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 KLF1Q13351 362 aaPredicted RBP15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 TCTE1Q5JU00 501 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 PTRHD1Q6GMV3 140 aaKnown RBP15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 UNC5DQ6UXZ4 953 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 RAD9BQ6WBX8 426 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 Q6ZS92 163 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 PRSS58Q8IYP2 241 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 KRT222Q8N1A0 295 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 TXLNBQ8N3L3 684 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 OR2L8Q8NGY9 312 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 SLC35B2Q8TB61 432 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 DNAJB14Q8TBM8 379 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 RANBP9Q96S59 729 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 CRB3Q9BUF7 120 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 WDR54Q9H977 334 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 CATSPERZQ9NTU4 200 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 NTNG1Q9Y2I2 539 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 MAU2Q9Y6X3 613 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 SPTBP11277 2137 aa15.17■□□□□ 0.02
CHMP4A-204ENST00000530996 ENO4A6NNW6 628 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 RASGRF2O14827 1237 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 ITGAXP20702 1163 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 PER3P56645 1201 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 NKG7Q16617 165 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 FIGLAQ6QHK4 219 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 COX15Q7KZN9 410 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 NLRP9Q7RTR0 991 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 OVCH1Q7RTY7 1134 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 LDB1Q86U70 411 aaPredicted RBP15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 CCDC89Q8N998 374 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 ST6GALNAC3Q8NDV1 305 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 THOC3Q96J01 351 aaKnown RBP15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 SPSB2Q99619 263 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 MIPEPQ99797 713 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 ETNK1Q9HBU6 452 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 RAB6BQ9NRW1 208 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 GNPTGQ9UJJ9 305 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 TCAF1Q9Y4C2 921 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 HS3ST3B1Q9Y662 390 aa15.16■□□□□ 0.02
CHMP4A-204ENST00000530996 DOPEY1Q5JWR5 2465 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 SOCS6O14544 535 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 ALBP02768 609 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 EIF2S1P05198 315 aaKnown RBP15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 APRTP07741 180 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 ADRA1DP25100 572 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 PSMA3P25788 255 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 PSMB5P28074 263 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 GRIA1P42261 906 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 OR1D4P47884 311 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 ZNF75DP51815 510 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 SOX8P57073 446 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 KIF5AQ12840 1032 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 SEMA3AQ14563 771 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 ZNF169Q14929 603 aaPredicted RBP15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 YOD1Q5VVQ6 348 aaPredicted RBP15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 FCRL6Q6DN72 434 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 CNSTQ6PJW8 725 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 FAM180AQ6UWF9 173 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 ZNF534Q76KX8 674 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 GRHL3Q8TE85 626 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 COG1Q8WTW3 980 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 NACC2Q96BF6 587 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 MRFAP1L1Q96HT8 127 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 MAGEB10Q96LZ2 347 aaPredicted RBP15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 ZNF778Q96MU6 729 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 PANX3Q96QZ0 392 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 LHPPQ9H008 270 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 SEMA3GQ9NS98 782 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 TTC7AQ9ULT0 858 aaPredicted RBP15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 ZNF148Q9UQR1 794 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 RUVBL2Q9Y230 463 aaKnown RBP15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 OSGIN2Q9Y236 505 aa15.15■□□□□ 0.02
CHMP4A-204ENST00000530996 PRRC2CQ9Y520 2896 aaKnown RBP15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 MAP2K7O14733 419 aa15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 PRMT5O14744 637 aaPredicted RBP15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 LIASO43766 372 aa15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 ACPPP15309 386 aa15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 TSFMP43897 325 aaKnown RBP15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 TTPAP49638 278 aa15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 EIF3BP55884 814 aaKnown RBP15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 OCA2Q04671 838 aa15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 SNX1Q13596 522 aa15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 KIRREL2Q6UWL6 708 aa15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 LINC00696Q6ZRV3 163 aa15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 OTOAQ7RTW8 1153 aa15.14■□□□□ 0.01
CHMP4A-204ENST00000530996 FOPNLQ96NB1 174 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms