RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ERRFI1Q9UJM3 462 aaPredicted RBP4.26□□□□□ -1.73
C11orf88-204ENST00000529661 LEF1Q9UJU2 399 aaPredicted RBP4.26□□□□□ -1.73
C11orf88-204ENST00000529661 A0A1W2PPI3 338 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 A0A1W2PS18 150 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 A4D1N5 150 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 OOEPA6NGQ2 149 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 E9PI62 339 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 CTSVO60911 334 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 MOCS3O95396 460 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 ACSL3O95573 720 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 INHBAP08476 426 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 CKMT2P17540 419 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 MARK3P27448 753 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 WNT5AP41221 380 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 THOP1P52888 689 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 DVL1P1P54792 670 aaPredicted RBP4.25□□□□□ -1.73
C11orf88-204ENST00000529661 DLK1P80370 383 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 DMP1Q13316 513 aaPredicted RBP4.25□□□□□ -1.73
C11orf88-204ENST00000529661 MFAP5Q13361 173 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 TNK1Q13470 666 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 CUL3Q13618 768 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 KIR2DS3Q14952 304 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 SLMAPQ14BN4 828 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 CDO1Q16878 200 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 KRTAP27-1Q3LI81 207 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 FAM174BQ3ZCQ3 159 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 ANKRD20A4Q4UJ75 823 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 ASPRV1Q53RT3 343 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 ANKRD20A8PQ5CZ79 823 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 ANKRD20A2Q5SQ80 823 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 SPOUT1Q5T280 376 aaKnown RBP4.25□□□□□ -1.73
C11orf88-204ENST00000529661 ANKRD20A1Q5TYW2 823 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 ANKRD20A3Q5VUR7 823 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 OTOAQ7RTW8 1153 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 SNX32Q86XE0 403 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 METTL27Q8N6F8 245 aaPredicted RBP4.25□□□□□ -1.73
C11orf88-204ENST00000529661 BMPERQ8N8U9 685 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 NHLRC2Q8NBF2 726 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 ATAD1Q8NBU5 361 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 HEXDCQ8WVB3 486 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 IRGQQ8WZA9 623 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 DNASE1L2Q92874 299 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 PTP4A1Q93096 173 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 SPATA33Q96N06 139 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 NAP1L5Q96NT1 182 aaPredicted RBP4.25□□□□□ -1.73
C11orf88-204ENST00000529661 RAD9AQ99638 391 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 PELI2Q9HAT8 420 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 APOBEC3GQ9HC16 384 aaKnown RBP4.25□□□□□ -1.73
C11orf88-204ENST00000529661 ERAP1Q9NZ08 941 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 MTUS1Q9ULD2 1270 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 HEG1Q9ULI3 1381 aa4.25□□□□□ -1.73
C11orf88-204ENST00000529661 GAPDHSO14556 408 aaPredicted RBP4.24□□□□□ -1.73
C11orf88-204ENST00000529661 SUPT20HL2P0C7V6 817 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 ATP6V1B1P15313 513 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 EPCAMP16422 314 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 RGS7P49802 495 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 CLDN15P56746 228 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 RPS18P62269 152 aaKnown RBP4.24□□□□□ -1.73
C11orf88-204ENST00000529661 PITX1P78337 314 aaPredicted RBP4.24□□□□□ -1.73
C11orf88-204ENST00000529661 VEZF1Q14119 521 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 RRS1Q15050 365 aaKnown RBP4.24□□□□□ -1.73
C11orf88-204ENST00000529661 CA9Q16790 459 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 UGT3A2Q3SY77 523 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 MCMDC2Q4G0Z9 681 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 CYP4A22Q5TCH4 519 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 C11orf63Q6NUN7 778 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 NOTUMQ6P988 496 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 C19orf48Q6RUI8 117 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 ENPP7Q6UWV6 458 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 GBP6Q6ZN66 633 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 KCTD8Q6ZWB6 473 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 ARHGAP22Q7Z5H3 698 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 FOXP4Q8IVH2 680 aaPredicted RBP4.24□□□□□ -1.73
C11orf88-204ENST00000529661 NUP93Q8N1F7 819 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 GRK7Q8WTQ7 553 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 CCDC107Q8WV48 283 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 TRMT61BQ9BVS5 477 aaKnown RBP4.24□□□□□ -1.73
C11orf88-204ENST00000529661 ZNF334Q9HCZ1 680 aaPredicted RBP4.24□□□□□ -1.73
C11orf88-204ENST00000529661 VPS18Q9P253 973 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 FAF1Q9UNN5 650 aaPredicted RBP4.24□□□□□ -1.73
C11orf88-204ENST00000529661 TRIM17Q9Y577 477 aa4.24□□□□□ -1.73
C11orf88-204ENST00000529661 TCF20Q9UGU0 1960 aaKnown RBP4.23□□□□□ -1.73
C11orf88-204ENST00000529661 IGSF1Q8N6C5 1336 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 IGLV5-45A0A087WSX0 123 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 A0A1W2PRB8 838 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 GOSR1O95249 250 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 IGHV4-39P01824 125 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 HSD17B3P37058 310 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 MFAP3P55082 362 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 CX3CL1P78423 397 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 MBTD1Q05BQ5 628 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 TCTE1Q5JU00 501 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 PDSS1Q5T2R2 415 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
C11orf88-204ENST00000529661 TMEM182Q6ZP80 229 aaPredicted RBP4.23□□□□□ -1.73
C11orf88-204ENST00000529661 MARK2Q7KZI7 788 aaKnown RBP4.23□□□□□ -1.73
C11orf88-204ENST00000529661 CCDC91Q7Z6B0 441 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 TMEM139Q8IV31 216 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 UNC45BQ8IWX7 931 aa4.23□□□□□ -1.73
C11orf88-204ENST00000529661 MSANTD4Q8NCY6 345 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms