RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 CELA2BP08218 269 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 CHRM5P08912 532 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ANKRD34CP0C6C1 535 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 GIMD1P0DJR0 217 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ERGP11308 486 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 MLLT3P42568 568 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 GLRBP48167 497 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 MAZP56270 477 aaKnown RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 DNAJB13P59910 316 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 MAGOHP61326 146 aaKnown RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 HERVK_113P63132 956 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 TIAL1Q01085 375 aaKnown RBP eCLIP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 PRKG2Q13237 762 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ZNF460Q14592 562 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 PUM1Q14671 1186 aaKnown RBP eCLIP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 SETDB1Q15047 1291 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 TCEA2Q15560 299 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 SF1Q15637 639 aaKnown RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 PPP1R3AQ16821 1122 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 SLC5A12Q1EHB4 618 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 PRAMEF13Q5VWM6 474 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 LIPMQ5VYY2 423 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ATG16L1Q676U5 607 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 AGTRAPQ6RW13 159 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 LCTLQ6UWM7 567 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ZYG11AQ6WRX3 759 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 MTERF4Q7Z6M4 381 aaKnown RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 C17orf64Q86WR6 236 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 KLHDC8AQ8IYD2 350 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 CENPLQ8N0S6 344 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 C4orf33Q8N1A6 199 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 KRT78Q8N1N4 520 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 LILRA3Q8N6C8 439 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 SPDYE1Q8NFV5 336 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 OR4E2Q8NGC2 313 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 OR8K5Q8NH50 307 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 OR56A3Q8NH54 315 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 UBTD2Q8WUN7 234 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ANKRD49Q8WVL7 239 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 DYDC1Q8WWB3 177 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 N4BP2L2Q92802 583 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ATP6V1E2Q96A05 226 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 RHBDF1Q96CC6 855 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 THAP11Q96EK4 314 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 CCDC97Q96F63 343 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 MED8Q96G25 268 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ATOH8Q96SQ7 321 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 PKP4Q99569 1192 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 SLC30A3Q99726 388 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ERVK-6Q9BXR3 956 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 NLNQ9BYT8 704 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 EHD1Q9H4M9 534 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 MRPS30Q9NP92 439 aaKnown RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 FSCN3Q9NQT6 498 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 DNAJC11Q9NVH1 559 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 SCHIP1Q9P0W5 487 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 STOX2Q9P2F5 926 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 CPSF2Q9P2I0 782 aaKnown RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 GALPQ9UBC7 116 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 PCYT1BQ9Y5K3 369 aaPredicted RBP7.68□□□□□ -1.18
SSBP3-211ENST00000528787 ST14Q9Y5Y6 855 aa7.68□□□□□ -1.18
SSBP3-211ENST00000528787 PTPRZ1P23471 2315 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TRBV23OR9-2A0A075B6M9 112 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 A0A0J9YY10 115 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 A0A1W2PPM1 405 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 OR6C74A6NCV1 312 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 URADA6NGE7 173 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 E7ENX8 843 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 K7EPI3 171 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CDC7O00311 574 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PLIN3O60664 434 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 RASSF9O75901 435 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CHEK2O96017 543 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 RPLP0P05388 317 aaKnown RBP7.67□□□□□ -1.18
SSBP3-211ENST00000528787 MSL3P1P0C860 447 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 EZRP15311 586 aaKnown RBP7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PCSK2P16519 638 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 IMPDH1P20839 514 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CDH3P22223 829 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CSTF2P33240 577 aaKnown RBP eCLIP7.67□□□□□ -1.18
SSBP3-211ENST00000528787 HNF4AP41235 474 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 BDKRB1P46663 353 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 ACADVLP49748 655 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 NOVA1P51513 510 aaKnown RBP7.67□□□□□ -1.18
SSBP3-211ENST00000528787 HK2P52789 917 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TBPL1P62380 186 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 ACY1Q03154 408 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TAP2Q03519 686 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 ZNF33BQ06732 778 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PRDX1Q06830 199 aaKnown RBP7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CDC16Q13042 620 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PCBP2Q15366 365 aaKnown RBP eCLIP7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PDK4Q16654 411 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PFKFB4Q16877 469 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PPM1JQ5JR12 505 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TMEM164Q5U3C3 297 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 KCTD16Q68DU8 428 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 GUSBP11Q6P575 273 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 SPESP1Q6UW49 350 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TMEM207Q6UWW9 146 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms