RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 ASZ1Q8WWH4 475 aa11.08□□□□□ -0.64
SRPRA-203ENST00000528744 N4BP2L2Q92802 583 aaPredicted RBP11.08□□□□□ -0.64
SRPRA-203ENST00000528744 PTERQ96BW5 349 aa11.08□□□□□ -0.64
SRPRA-203ENST00000528744 SNRNP40Q96DI7 357 aaKnown RBP11.08□□□□□ -0.64
SRPRA-203ENST00000528744 SLC30A3Q99726 388 aa11.08□□□□□ -0.64
SRPRA-203ENST00000528744 DPH2Q9BQC3 489 aaPredicted RBP11.08□□□□□ -0.64
SRPRA-203ENST00000528744 DHRS4Q9BTZ2 278 aa11.08□□□□□ -0.64
SRPRA-203ENST00000528744 KIFC1Q9BW19 673 aa11.08□□□□□ -0.64
SRPRA-203ENST00000528744 FRMD8P1Q9BZ68 369 aaPredicted RBP11.08□□□□□ -0.64
SRPRA-203ENST00000528744 GPR83Q9NYM4 423 aa11.08□□□□□ -0.64
SRPRA-203ENST00000528744 IL1RAPL1Q9NZN1 696 aa11.08□□□□□ -0.64
SRPRA-203ENST00000528744 TSR3Q9UJK0 312 aaKnown RBP11.08□□□□□ -0.64
SRPRA-203ENST00000528744 TTC7AQ9ULT0 858 aaPredicted RBP11.08□□□□□ -0.64
SRPRA-203ENST00000528744 NTNG1Q9Y2I2 539 aa11.08□□□□□ -0.64
SRPRA-203ENST00000528744 SPTAN1Q13813 2472 aaKnown RBP11.07□□□□□ -0.64
SRPRA-203ENST00000528744 C9J4A7 227 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 SOCS6O14544 535 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 RASGRF2O14827 1237 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 MAP3K7O43318 606 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 NIPSNAP2O75323 286 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 VPS4BO75351 444 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 SNRNP200O75643 2136 aaKnown RBP11.07□□□□□ -0.64
SRPRA-203ENST00000528744 FGGP02679 453 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 FMO4P31512 558 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 NPY2RP49146 381 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 SF1Q15637 639 aaKnown RBP11.07□□□□□ -0.64
SRPRA-203ENST00000528744 NKG7Q16617 165 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 UNC5DQ6UXZ4 953 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 CENPUQ71F23 418 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 NLRP9Q7RTR0 991 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 OVCH1Q7RTY7 1134 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 DCUN1D3Q8IWE4 304 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 AGGF1Q8N302 714 aaeCLIP11.07□□□□□ -0.64
SRPRA-203ENST00000528744 GALNT16Q8N428 558 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 CISD2Q8N5K1 135 aaKnown RBP11.07□□□□□ -0.64
SRPRA-203ENST00000528744 CCDC89Q8N998 374 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 PPHLN1Q8NEY8 458 aaKnown RBP11.07□□□□□ -0.64
SRPRA-203ENST00000528744 OR2A1Q8NGT9 310 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 LPGAT1Q92604 370 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 PEX13Q92968 403 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 SPSB2Q99619 263 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 LZTFL1Q9NQ48 299 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 ENAMQ9NRM1 1142 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 ASF1BQ9NVP2 202 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 VPS4AQ9UN37 437 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 MED16Q9Y2X0 877 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 PCDHGB7Q9Y5F8 929 aa11.07□□□□□ -0.64
SRPRA-203ENST00000528744 UTP20O75691 2785 aaKnown RBP11.07□□□□□ -0.64
SRPRA-203ENST00000528744 ESPL1Q14674 2120 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 DPM1O60762 260 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 VAPBO95292 243 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 GAS8O95995 478 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 APOA4P06727 396 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 RPS3P23396 243 aaKnown RBP eCLIP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 FOLR3P41439 243 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 EIF3BP55884 814 aaKnown RBP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 SOX8P57073 446 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 BASP1P80723 227 aaKnown RBP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 Q0VFX4 171 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 MYBPC3Q14896 1274 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 ACSBG2Q5FVE4 666 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 WASHC2DQ5SRD0 308 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 PTRHD1Q6GMV3 140 aaKnown RBP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 TTC27Q6P3X3 843 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 LRRC8BQ6P9F7 803 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 KIRREL2Q6UWL6 708 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 CUZD1Q86UP6 607 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 CAND1Q86VP6 1230 aaKnown RBP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 RAB43Q86YS6 212 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 PNPLA2Q96AD5 504 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 TTC1Q99614 292 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 MIPEPQ99797 713 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 NDC1Q9BTX1 674 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 SOX17Q9H6I2 414 aaPredicted RBP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 SLC6A20Q9NP91 592 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 EIF2B3Q9NR50 452 aaKnown RBP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 CUTCQ9NTM9 273 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 IRAK4Q9NWZ3 460 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 CTSFQ9UBX1 484 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 NDOR1Q9UHB4 597 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 GPN3Q9UHW5 284 aaPredicted RBP11.06□□□□□ -0.64
SRPRA-203ENST00000528744 CRYL1Q9Y2S2 319 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 HS3ST3B1Q9Y662 390 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 MAU2Q9Y6X3 613 aa11.06□□□□□ -0.64
SRPRA-203ENST00000528744 PRRC2CQ9Y520 2896 aaKnown RBP11.05□□□□□ -0.64
SRPRA-203ENST00000528744 IGKV1-8A0A0C4DH67 115 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 A0A0J9YVX5 310 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 FITM1A5D6W6 292 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 VSTM2BA6NLU5 285 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 CEP104O60308 925 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 NDUFS3O75489 264 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 MATN4O95460 622 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 CBX6O95503 412 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 S1PR4O95977 384 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 COL8A1P27658 744 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 TTPAP49638 278 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 VPS41P49754 854 aa11.05□□□□□ -0.64
SRPRA-203ENST00000528744 EFNA3P52797 238 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms