RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 NCEH1Q6PIU2 408 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 VITQ6UXI7 678 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 CD300LDQ6UXZ3 194 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 NEK10Q6ZWH5 1172 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 USP51Q70EK9 711 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 MARK2Q7KZI7 788 aaKnown RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 TRIM74Q86UV6 250 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 TRIM73Q86UV7 250 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 KCNMB4Q86W47 210 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 SLC26A11Q86WA9 606 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 LRRC6Q86X45 466 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 TDRPQ86YL5 185 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 SFTPA1Q8IWL2 248 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 RIBC1Q8N443 379 aaPredicted RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 RYBPQ8N488 228 aaPredicted RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 LILRA3Q8N6C8 439 aaPredicted RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 ZNF366Q8N895 744 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 PNPLA1Q8N8W4 532 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 LPCAT1Q8NF37 534 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 BLOC1S5Q8TDH9 187 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 BPIFB1Q8TDL5 484 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 MZB1Q8WU39 189 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 OSCP1Q8WVF1 389 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 SORCS1Q8WY21 1168 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 ERLEC1Q96DZ1 483 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 CERS2Q96G23 380 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 ATXN7L3BQ96GX2 97 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 FEM1CQ96JP0 617 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 SERAC1Q96JX3 654 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 DNAJC1Q96KC8 554 aaKnown RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 WDR92Q96MX6 357 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 PPP1R2P1Q96PQ5 205 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 NUDCD1Q96RS6 583 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 TRIB3Q96RU7 358 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 AGAP2Q99490 1192 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 NAT9Q9BTE0 207 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 KIFC1Q9BW19 673 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 PLA2G2FQ9BZM2 168 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 STMN4Q9H169 189 aaPredicted RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 C12orf65Q9H3J6 166 aaKnown RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 POMKQ9H5K3 350 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 RABEP2Q9H5N1 569 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 KCNK9Q9NPC2 374 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 HPS4Q9NQG7 708 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 VPS45Q9NRW7 570 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 LANCL2Q9NS86 450 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 IARS2Q9NSE4 1012 aaKnown RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 C20orf96Q9NUD7 363 aaPredicted RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 UBAP1Q9NZ09 502 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 MOCS1Q9NZB8 636 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 KLHL14Q9P2G3 628 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 IFT80Q9P2H3 777 aaPredicted RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 SLCO3A1Q9UIG8 710 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 ZFP69BQ9UJL9 534 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 SLC25A13Q9UJS0 675 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 GGA2Q9UJY4 613 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 ARL5AQ9Y689 179 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 FAM169AQ9Y6X4 670 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 HELZ2Q9BYK8 2649 aaKnown RBP4.12□□□□□ -1.75
CD44-226ENST00000527889 KIF26BQ2KJY2 2108 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 TECTAO75443 2155 aa4.12□□□□□ -1.75
CD44-226ENST00000527889 SMG1Q96Q15 3661 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 SPEGQ15772 3267 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 A0A0B4J203 849 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 IQANK1A0A1B0GTG1 560 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 LOC285095A0A1B0GVY8 99 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TMEM120BA0PK00 339 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 HEATR9A2RTY3 570 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 FAM234BA2RU67 622 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ANTXRLA6NF34 631 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 MROH6A6NGR9 719 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 OR51F1A6NGY5 319 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TTC34A8MYJ7 566 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 H0Y858 1186 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 AP3B1O00203 1094 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 BTN3A1O00481 513 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 AREL1O15033 823 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 LDB2O43679 373 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TULP3O75386 442 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ZNF821O75541 412 aaPredicted RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 ALDH1A2O94788 518 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 VAPBO95292 243 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 MATN4O95460 622 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ABHD16AO95870 558 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TOP3BO95985 862 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 MT-ND3P03897 115 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 UGT2B4P06133 528 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 SNRPAP09012 282 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 CISD3P0C7P0 127 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 PRSS56P0CW18 603 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 MTHFD1P11586 935 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 HLA-EP13747 358 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CTPS1P17812 591 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 POLR2EP19388 210 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 HLA-DPA1P20036 260 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CAPN3P20807 821 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 FPR1P21462 350 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ADRA1DP25100 572 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ATP5DP30049 168 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 SLC8A1P32418 973 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms