RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 OTUD6BQ8N6M0 293 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 PEX13Q92968 403 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 PANX3Q96QZ0 392 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 ZNF552Q9H707 407 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 MARCH4Q9P2E8 410 aaPredicted RBP21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 CDC23Q9UJX2 597 aa21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 SPENQ96T58 3664 aaKnown RBP21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 PRRC2CQ9Y520 2896 aaKnown RBP21.49■■□□□ 1.03
TRAPPC4-208ENST00000527680 SPTAN1Q13813 2472 aaKnown RBP21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 MDC1Q14676 2089 aaKnown RBP21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 A0A1B0GX78 115 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 AGPSO00116 658 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 UMODP07911 640 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 RPL22P35268 128 aaKnown RBP21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 GLRBP48167 497 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 CRADDP78560 199 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 GRM7Q14831 915 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 RPS6KA1Q15418 735 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 GSTA5Q7RTV2 222 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 OTOAQ7RTW8 1153 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 OVCH1Q7RTY7 1134 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 UBE2Q2Q8WVN8 375 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 RAD51AP1Q96B01 352 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 TSGA10Q9BZW7 698 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 CUTCQ9NTM9 273 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 ASF1BQ9NVP2 202 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 CUEDC1Q9NWM3 386 aaPredicted RBP21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 BFARQ9NZS9 450 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 GNPTGQ9UJJ9 305 aa21.48■■□□□ 1.03
TRAPPC4-208ENST00000527680 RASGRF2O14827 1237 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 KPNA5O15131 536 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 MCM3P25205 808 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 BASP1P80723 227 aaKnown RBP21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 AIMP2Q13155 320 aaKnown RBP21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 GRB7Q14451 532 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 NR6A1Q15406 480 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 FAM214AQ32MH5 1076 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 TCTE1Q5JU00 501 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 IRAK1BP1Q5VVH5 260 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 FCRL6Q6DN72 434 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 TMEM151BQ8IW70 566 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 TTC29Q8NA56 475 aaPredicted RBP21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 ZUFSPQ96AP4 578 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 FOPNLQ96NB1 174 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 SELENOSQ9BQE4 189 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 MENTQ9BUN1 341 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 RAB11FIP5Q9BXF6 653 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 SLC22A11Q9NSA0 550 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 MRFAP1Q9Y605 127 aa21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 COPG1Q9Y678 874 aaKnown RBP21.47■■□□□ 1.03
TRAPPC4-208ENST00000527680 UTP20O75691 2785 aaKnown RBP21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 GOLGA6L6A8MZA4 724 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 DSCR3O14972 297 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 MMP11P24347 488 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 NPY2RP49146 381 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 EIF3BP55884 814 aaKnown RBP21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 ELOAQ14241 798 aaKnown RBP21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 CCNG2Q16589 344 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 YOD1Q5VVQ6 348 aaPredicted RBP21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 IGFL3Q6UXB1 125 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 SHISA6Q6ZSJ9 500 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 FKBP10Q96AY3 582 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 NACC2Q96BF6 587 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 IL22Q9GZX6 179 aa21.46■■□□□ 1.03
TRAPPC4-208ENST00000527680 A1L4Q6 167 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 TARM1B6A8C7 271 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 AP3B1O00203 1094 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 ALBP02768 609 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 NMBRP28336 390 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 OR1D4P47884 311 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 SOX8P57073 446 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 VSX2P58304 361 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 NKG7Q16617 165 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 C4orf22Q6V702 233 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 SDCCAG8Q86SQ7 713 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 LRRC6Q86X45 466 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 GAS2L3Q86XJ1 694 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 METTL27Q8N6F8 245 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 MIPEPQ99797 713 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 SOX17Q9H6I2 414 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 WDR54Q9H977 334 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 ZBTB20Q9HC78 741 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 TSR3Q9UJK0 312 aaKnown RBP21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 FBXL4Q9UKA2 621 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 NFS1Q9Y697 457 aa21.45■■□□□ 1.02
TRAPPC4-208ENST00000527680 SRPX2O60687 465 aaPredicted RBP21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 ALOX12BO75342 701 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 C1orf105O95561 183 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 DDAH2O95865 285 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 BDKRB1P46663 353 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 WASHC2DQ5SRD0 308 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 PRAMEF13Q5VWM6 474 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 CNSTQ6PJW8 725 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 PARP9Q8IXQ6 854 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 MPP5Q8N3R9 675 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 MAGEC3Q8TD91 643 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 VPS50Q96JG6 964 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 P2RY12Q9H244 342 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 SLC6A20Q9NP91 592 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms