RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 TMEM9Q9P0T7 183 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 KLHL3Q9UH77 587 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 GRID1Q9ULK0 1009 aa13.28□□□□□ -0.28
CD44-224ENST00000526669 OR5K3A6NET4 321 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 SYCE1LA8MT33 242 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 AGRPO00253 132 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 TM4SF5O14894 197 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 TAPBPO15533 448 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 DUX1O43812 170 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 TYROBPO43914 113 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 SMIM24O75264 130 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 RFPL3O75679 317 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 ERGP11308 486 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 MTHFD2P13995 350 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 PNLIPP16233 465 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 MPSTP25325 297 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 CD1CP29017 333 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 HPDP32754 393 aaPredicted RBP13.27□□□□□ -0.29
CD44-224ENST00000526669 RPA3P35244 121 aaPredicted RBP13.27□□□□□ -0.29
CD44-224ENST00000526669 CAPZBP47756 277 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 HSPA7P48741 367 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 AGTR2P50052 363 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 NOVA1P51513 510 aaKnown RBP13.27□□□□□ -0.29
CD44-224ENST00000526669 TBPL1P62380 186 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 CDKL1Q00532 357 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 CFHR1Q03591 330 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 CYP2A13Q16696 494 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 PFKFB4Q16877 469 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 ZXDCQ2QGD7 858 aaPredicted RBP13.27□□□□□ -0.29
CD44-224ENST00000526669 SNAP47Q5SQN1 464 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 ARMC6Q6NXE6 501 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 TMPRSS9Q7Z410 1059 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 SLCO6A1Q86UG4 719 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 FBXO39Q8N4B4 442 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 TMEM151AQ8N4L1 468 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 PTGR2Q8N8N7 351 aaPredicted RBP13.27□□□□□ -0.29
CD44-224ENST00000526669 PDPRQ8NCN5 879 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 PPM1MQ96MI6 270 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 TGM7Q96PF1 710 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 NUDT22Q9BRQ3 303 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 MLXIPLQ9NP71 852 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 ACSS2Q9NR19 701 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 TOR4AQ9NXH8 423 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 ACTR10Q9NZ32 417 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 PLLPQ9Y342 182 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 ASB1Q9Y576 335 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 ACTL7BQ9Y614 415 aa13.27□□□□□ -0.29
CD44-224ENST00000526669 A0A1W2PPV9 198 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 PIPSLA2A3N6 862 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 DCDC2BA2VCK2 349 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 A8MT66 165 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 TARM1B6A8C7 271 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 E7ENX8 843 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 CSRP1P21291 193 aaKnown RBP13.26□□□□□ -0.29
CD44-224ENST00000526669 GDF5P43026 501 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 YBX1P67809 324 aaKnown RBP13.26□□□□□ -0.29
CD44-224ENST00000526669 SIM1P81133 766 aaPredicted RBP13.26□□□□□ -0.29
CD44-224ENST00000526669 TAP2Q03519 686 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 PRKAA1Q13131 559 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 MPP2Q14168 576 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 SPEGQ15772 3267 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 CCDC153Q494R4 210 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 THEMIS2Q5TEJ8 643 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 SULT1C3Q6IMI6 304 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 FAM92BQ6ZTR7 304 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 RPS27LQ71UM5 84 aaKnown RBP13.26□□□□□ -0.29
CD44-224ENST00000526669 LCA5Q86VQ0 697 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 LRRC56Q8IYG6 542 aaPredicted RBP13.26□□□□□ -0.29
CD44-224ENST00000526669 MGARPQ8TDB4 240 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 SMPDL3AQ92484 453 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 PKNOX2Q96KN3 472 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 GFM1Q96RP9 751 aaKnown RBP13.26□□□□□ -0.29
CD44-224ENST00000526669 MECRQ9BV79 373 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 KLHL25Q9H0H3 589 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 ABCG4Q9H172 646 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 CCDC177Q9NQR7 707 aaPredicted RBP13.26□□□□□ -0.29
CD44-224ENST00000526669 OR6C2Q9NZP2 312 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 CCDC88CQ9P219 2028 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 PTBP2Q9UKA9 531 aaKnown RBP13.26□□□□□ -0.29
CD44-224ENST00000526669 SH2B3Q9UQQ2 575 aa13.26□□□□□ -0.29
CD44-224ENST00000526669 FER1L5A0AVI2 2057 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 TMEM120BA0PK00 339 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 FAM221BA6H8Z2 402 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 ZNF839A8K0R7 811 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 A8MU76 341 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 G3V2L1 256 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 CAPN5O15484 640 aaPredicted RBP13.25□□□□□ -0.29
CD44-224ENST00000526669 PRPF4O43172 522 aaKnown RBP eCLIP13.25□□□□□ -0.29
CD44-224ENST00000526669 KIF1CO43896 1103 aaKnown RBP13.25□□□□□ -0.29
CD44-224ENST00000526669 DLX3O60479 287 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 CCNT2O60583 730 aaKnown RBP13.25□□□□□ -0.29
CD44-224ENST00000526669 WDR47O94967 919 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 SIX3O95343 332 aaPredicted RBP13.25□□□□□ -0.29
CD44-224ENST00000526669 FTH1P19P0C7X4 201 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 MYL2P10916 166 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 HOXB3P14651 431 aaPredicted RBP13.25□□□□□ -0.29
CD44-224ENST00000526669 UGT2B7P16662 529 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 TAC1P20366 129 aa13.25□□□□□ -0.29
CD44-224ENST00000526669 OAS2P29728 719 aaKnown RBP13.25□□□□□ -0.29
CD44-224ENST00000526669 GPLD1P80108 840 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms