RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 WDR36Q8NI36 951 aaKnown RBP20.05■□□□□ 0.8
CD44-222ENST00000526025 KCTD4Q8WVF5 259 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 PTERQ96BW5 349 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 SLC41A2Q96JW4 573 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 GPR78Q96P69 363 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 CMKLR1Q99788 373 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 SCNM1Q9BWG6 230 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 NRSN2Q9GZP1 204 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 PCBD2Q9H0N5 130 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 VPS11Q9H270 941 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 SPHK1Q9NYA1 384 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 CIDEBQ9UHD4 219 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 MSRB2Q9Y3D2 182 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 KLK4Q9Y5K2 254 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 A0A1W2PPV9 198 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 KRT87PA6NCN2 255 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 ISM1B1AKI9 464 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 KERAO60938 352 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 ZBTB11O95625 1053 aaPredicted RBP20.04■□□□□ 0.8
CD44-222ENST00000526025 ANXA5P08758 320 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 TFEBP19484 476 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 MLLT3P42568 568 aaPredicted RBP20.04■□□□□ 0.8
CD44-222ENST00000526025 SLCO1A2P46721 670 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 IRF9Q00978 393 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 CAMK2BQ13554 666 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 NAA25Q14CX7 972 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 C16orf72Q14CZ0 275 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 TGFBIQ15582 683 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 OR4D1Q15615 310 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 AGTRAPQ6RW13 159 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 IGF2-ASQ6U949 168 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 FAM92BQ6ZTR7 304 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 FRA10AC1Q70Z53 315 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 CROCCP2Q86T23 111 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 GPSM1Q86YR5 675 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 SYTL1Q8IYJ3 562 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 TCAIMQ8N3R3 496 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 SPATA6LQ8N4H0 392 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 LMNTD1Q8N9Z9 388 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 OR2W6PQ8NHA6 318 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 NXNL1Q96CM4 212 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 MAP3K3Q99759 626 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 TBK1Q9UHD2 729 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 BTRCQ9Y297 605 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 PCDHB11Q9Y5F2 797 aa20.04■□□□□ 0.8
CD44-222ENST00000526025 A0A0J9YY10 115 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 FAM149AA5PLN7 773 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 SYCE1LA8MT33 242 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 RASSF9O75901 435 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 CCNDBP1O95273 360 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 MT-ND3P03897 115 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 NELFEP18615 380 aaKnown RBP20.03■□□□□ 0.8
CD44-222ENST00000526025 CDH3P22223 829 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 MPSTP25325 297 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 CSTF2P33240 577 aaKnown RBP eCLIP20.03■□□□□ 0.8
CD44-222ENST00000526025 FASTKQ14296 549 aaKnown RBP20.03■□□□□ 0.8
CD44-222ENST00000526025 SNAP47Q5SQN1 464 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 LRIG3Q6UXM1 1119 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 PDPRQ8NCN5 879 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 OR2A1Q8NGT9 310 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 OR56A3Q8NH54 315 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 TSNARE1Q96NA8 513 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 ATOH8Q96SQ7 321 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 B3GNT4Q9C0J1 378 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 CCDC177Q9NQR7 707 aaPredicted RBP20.03■□□□□ 0.8
CD44-222ENST00000526025 KLHL3Q9UH77 587 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 KLK13Q9UKR3 277 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 PCDHGA8Q9Y5G5 932 aa20.03■□□□□ 0.8
CD44-222ENST00000526025 IGHV5-51A0A0C4DH38 117 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 B4E171 279 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 KIF1CO43896 1103 aaKnown RBP20.02■□□□□ 0.8
CD44-222ENST00000526025 TOP3BO95985 862 aaKnown RBP20.02■□□□□ 0.8
CD44-222ENST00000526025 GSTA1P08263 222 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 RBP1P09455 135 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 MSL3P1P0C860 447 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 TSPAN7P41732 249 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 LSSP48449 732 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 MBOAT1Q6ZNC8 495 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 RAB11FIP2Q7L804 512 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 KLHDC8AQ8IYD2 350 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 RCBTB1Q8NDN9 531 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 TRAPPC9Q96Q05 1148 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 SGPP1Q9BX95 441 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 ALG9Q9H6U8 611 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 POLR1BQ9H9Y6 1135 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 INTS7Q9NVH2 962 aaKnown RBP20.02■□□□□ 0.8
CD44-222ENST00000526025 ARGLU1Q9NWB6 273 aaPredicted RBP20.02■□□□□ 0.8
CD44-222ENST00000526025 UTP6Q9NYH9 597 aaKnown RBP20.02■□□□□ 0.8
CD44-222ENST00000526025 NUDT4Q9NZJ9 180 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 ANGPTL2Q9UKU9 493 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 RNF112Q9ULX5 631 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 LOXL2Q9Y4K0 774 aa20.02■□□□□ 0.8
CD44-222ENST00000526025 CEP295Q9C0D2 2601 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 SMIM23A6NLE4 172 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 PLD2O14939 933 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 IPO13O94829 963 aaKnown RBP20.01■□□□□ 0.79
CD44-222ENST00000526025 KRT15P19012 456 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 RPA3P35244 121 aaPredicted RBP20.01■□□□□ 0.79
CD44-222ENST00000526025 GGT5P36269 586 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 GMPRP36959 345 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms