RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 POLE2P56282 527 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 RPS15P62841 145 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 YBX1P67809 324 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 NFKB2Q00653 900 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 C2orf54Q08AI8 447 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 TSTA3Q13630 321 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 TTLL9Q3SXZ7 439 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 FCRL6Q6DN72 434 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 FIGLAQ6QHK4 219 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 SYT10Q6XYQ8 523 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 MCATQ8IVS2 390 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 CPNE9Q8IYJ1 553 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 SYTL1Q8IYJ3 562 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 RAB42Q8N4Z0 105 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 ZNF655Q8N720 491 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 ENDOVQ8N8Q3 282 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 C2CD4AQ8NCU7 369 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 OR9A1PQ8NGU1 263 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 MAGEC3Q8TD91 643 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 KCNJ9Q92806 393 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 INPP5DQ92835 1189 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 SLC22A18Q96BI1 424 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 CERS2Q96G23 380 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 SNF8Q96H20 258 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 LRFN5Q96NI6 719 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 PKP4Q99569 1192 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 WDR83Q9BRX9 315 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 AARSD1Q9BTE6 412 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 ACAT2Q9BWD1 397 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 RAB11FIP5Q9BXF6 653 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 PLAC1Q9HBJ0 212 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 RNF14Q9UBS8 474 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 ZC3H7BQ9UGR2 993 aaKnown RBP12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 PLCL2Q9UPR0 1127 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 DHRS7Q9Y394 339 aa12.36□□□□□ -0.43
TRAPPC4-205ENST00000525079 ATRXP46100 2492 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 A0A1W2PPV9 198 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 TP73O15350 636 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 VPS26AO75436 327 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 PSIP1O75475 530 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 SYF2O95926 243 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 AHSGP02765 367 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 CATP04040 527 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 MCM3P25205 808 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 ARL4CP56559 192 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 ETF1P62495 437 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 KCNAB2Q13303 367 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 HIF1AQ16665 826 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 RBM20Q5T481 1227 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 TRMT10BQ6PF06 316 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 SUSD1Q6UWL2 747 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 CYHR1Q6ZMK1 362 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 ZNF517Q6ZMY9 492 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 PIWIL4Q7Z3Z4 852 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 ZNF605Q86T29 641 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 PPFIBP2Q8ND30 876 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 CD200R1Q8TD46 325 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 APOBEC4Q8WW27 367 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 NAT9Q9BTE0 207 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 GPR87Q9BY21 358 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 CHRNA10Q9GZZ6 450 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 DPH5Q9H2P9 285 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 STARD5Q9NSY2 213 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 ABCF3Q9NUQ8 709 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 GEMIN8Q9NWZ8 242 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 EURLQ9NYK6 297 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 SPATA7Q9P0W8 599 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 DHCR7Q9UBM7 475 aaKnown RBP12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 COMMD10Q9Y6G5 202 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 TEX264Q9Y6I9 313 aa12.35□□□□□ -0.43
TRAPPC4-205ENST00000525079 PIEZO2Q9H5I5 2752 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 ZSCAN9O15535 394 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 NRP2O60462 931 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 CAPN1P07384 714 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 HBQ1P09105 142 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 MPC1LP0DKB6 136 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 PGGT1BP53609 377 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 CDKN2DP55273 166 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 TIAL1Q01085 375 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 PDIA2Q13087 525 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 IL10RAQ13651 578 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 SLC9A5Q14940 896 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 FASTKD3Q14CZ7 662 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 CYP2A13Q16696 494 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 CRTC2Q53ET0 693 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 TEDDM1Q5T9Z0 273 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 MLIPQ5VWP3 458 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 FAM198BQ6UWH4 519 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 NEK10Q6ZWH5 1172 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 SPATA4Q8NEY3 305 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 OR2L3Q8NG85 312 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 OR2A1Q8NGT9 310 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 HMGCLL1Q8TB92 370 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 EEF1AKMT1Q8WVE0 214 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 ASB11Q8WXH4 323 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 ZNF71Q9NQZ8 489 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 FAM114A2Q9NRY5 505 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 INTS7Q9NVH2 962 aaKnown RBP12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 KLHL42Q9P2K6 505 aa12.34□□□□□ -0.43
TRAPPC4-205ENST00000525079 TRMT6Q9UJA5 497 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms