RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 NEUROD6Q96NK8 337 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 FUCA2Q9BTY2 467 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 RBM4Q9BWF3 364 aaKnown RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 MARCH5Q9NX47 278 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 NYAP2Q9P242 653 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 ZNF215Q9UL58 517 aaPredicted RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 PA2G4Q9UQ80 394 aaKnown RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 VDAC3Q9Y277 283 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 DNAJC16Q9Y2G8 782 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 PRG3Q9Y2Y8 225 aaPredicted RBP3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 RP1P56715 2156 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 KDM3AQ9Y4C1 1321 aa3.66□□□□□ -1.82
NSMCE2-211ENST00000523549 TNRC6AQ8NDV7 1962 aaKnown RBP3.65□□□□□ -1.82
NSMCE2-211ENST00000523549 A0A0U1RQF3 1178 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 C17orf113A0A1B0GUU1 675 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 TYW5A2RUC4 315 aaKnown RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 MID1O15344 667 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 AP5Z1O43299 807 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ZIC3O60481 467 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 NDUFS7O75251 213 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 TIPRLO75663 272 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 CIAO1O76071 339 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 DDHD2O94830 711 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 HSPA5P11021 654 aaKnown RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 SRCP12931 536 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ZNF8P17098 575 aaPredicted RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 GJA1P17302 382 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 HOXA9P31269 272 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 GRK6P43250 576 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ACADVLP49748 655 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 BLKP51451 505 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 NR0B1P51843 470 aaKnown RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ACTR2P61160 394 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 KRT83P78385 493 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 IL9RQ01113 521 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 SP4Q02446 784 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 SOWAHAQ2M3V2 549 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ATP13A5Q4VNC0 1218 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 FAM122CQ6P4D5 195 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 PRSS55Q6UWB4 352 aaPredicted RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 SFR1Q86XK3 245 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 RNF168Q8IYW5 571 aaPredicted RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ZCCHC9Q8N567 271 aaKnown RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ENAHQ8N8S7 591 aaPredicted RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 TRIML1Q8N9V2 468 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 CHURC1Q8WUH1 139 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 RAB40AQ8WXH6 277 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ERGIC1Q969X5 290 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 TTC14Q96N46 770 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 LRRC3BQ96PB8 259 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 SMR3AQ99954 134 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 RIOK1Q9BRS2 568 aaKnown RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 PNNQ9H307 717 aaKnown RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 LRRC4Q9HBW1 653 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 KIF17Q9P2E2 1029 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 PNMA2Q9UL42 364 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 CDC14AQ9UNH5 594 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 GDAQ9Y2T3 454 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 PCDHGA1Q9Y5H4 931 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 SONP18583 2426 aaKnown RBP3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ABCB11O95342 1321 aa3.65□□□□□ -1.83
NSMCE2-211ENST00000523549 ZANQ9Y493 2812 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 A0A0G2JPF8 293 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 hCG_1642624A0A1W2PR95 340 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 HSPB2A8KAH6 182 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 HNRNPCL3B7ZW38 293 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 KLRF2D3W0D1 207 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 HNRNPCL1O60812 293 aaKnown RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 PEX14O75381 377 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 EIF3JO75822 258 aaKnown RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 IDH1O75874 414 aaKnown RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 NDUFB4O95168 129 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 ATP1A1P05023 1023 aaKnown RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 HNRNPCL4P0DMR1 293 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 RARGP13631 454 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 PTPN2P17706 415 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 ITGAXP20702 1163 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 MCCP23508 829 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 HNRNPH1P31943 449 aaKnown RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 IL15P40933 162 aaPredicted RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 FCHO2Q0JRZ9 810 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 TRIM14Q14142 442 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 MORC3Q14149 939 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 HSPB2Q16082 182 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 EDRF1Q3B7T1 1238 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 TMEM30BQ3MIR4 351 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 TUBB8Q3ZCM7 444 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 PPP6R3Q5H9R7 873 aaPredicted RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 PAPPA-AS1Q5QFB9 102 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 CPXM2Q8N436 756 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 TMEM57Q8N5G2 664 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 PARP16Q8N5Y8 322 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 GMCL1P1Q8NEA9 526 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 NDRG1Q92597 394 aaKnown RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 SLC39A13Q96H72 371 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 TMEM19Q96HH6 336 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 ADNPQ9H2P0 1102 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 RANBP17Q9H2T7 1088 aaKnown RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 RASSF1Q9NS23 344 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms