RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 PLA2G2CQ5R387 149 aa12.02□□□□□ -0.49
PABPC1-219ENST00000522387 ABRAXAS1Q6UWZ7 409 aa12.02□□□□□ -0.49
PABPC1-219ENST00000522387 ADAMTSL2Q86TH1 951 aa12.02□□□□□ -0.49
PABPC1-219ENST00000522387 MTDHQ86UE4 582 aaKnown RBP12.02□□□□□ -0.49
PABPC1-219ENST00000522387 FAM20CQ8IXL6 584 aa12.02□□□□□ -0.49
PABPC1-219ENST00000522387 SYTL1Q8IYJ3 562 aa12.02□□□□□ -0.49
PABPC1-219ENST00000522387 CCNYL1Q8N7R7 359 aa12.02□□□□□ -0.49
PABPC1-219ENST00000522387 PTGR2Q8N8N7 351 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-219ENST00000522387 SLC12A9Q9BXP2 914 aa12.02□□□□□ -0.49
PABPC1-219ENST00000522387 TRIT1Q9H3H1 467 aaKnown RBP12.02□□□□□ -0.49
PABPC1-219ENST00000522387 SEMA4GQ9NTN9 838 aa12.02□□□□□ -0.49
PABPC1-219ENST00000522387 LRRC42Q9Y546 428 aa12.02□□□□□ -0.49
PABPC1-219ENST00000522387 H0Y3Z8 333 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 PPM1DO15297 605 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 MPC1LP0DKB6 136 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 TYRP1P17643 537 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 ALDH4A1P30038 563 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 CDH13P55290 713 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 PLOD1Q02809 727 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-219ENST00000522387 GPR18Q14330 331 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 CHI3L2Q15782 390 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 CCDC153Q494R4 210 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 SFRP1Q8N474 314 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 ENDOVQ8N8Q3 282 aaKnown RBP12.01□□□□□ -0.49
PABPC1-219ENST00000522387 KYQ8NBH2 561 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 OR52E1Q8NGJ3 308 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 AGR3Q8TD06 166 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 PRR11Q96HE9 360 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-219ENST00000522387 CAMK1GQ96NX5 476 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 NSUN5Q96P11 429 aaKnown RBP12.01□□□□□ -0.49
PABPC1-219ENST00000522387 DENND2DQ9H6A0 471 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-219ENST00000522387 PARD6AQ9NPB6 346 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 NCKIPSDQ9NZQ3 722 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 PCDHGA5Q9Y5G8 931 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 LAMA5O15230 3695 aa12.01□□□□□ -0.49
PABPC1-219ENST00000522387 CCDC189A1A4V9 331 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 A8MT66 165 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 TARM1B6A8C7 271 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 CER1O95813 267 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 C8GP07360 202 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 ARL1P40616 181 aaPredicted RBP12□□□□□ -0.49
PABPC1-219ENST00000522387 CCT8P50990 548 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 NAGLUP54802 743 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 ILF2Q12905 390 aaKnown RBP12□□□□□ -0.49
PABPC1-219ENST00000522387 CCDC157Q569K6 752 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 TTC23LQ6PF05 361 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 ZNF438Q7Z4V0 828 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 RABEPKQ7Z6M1 372 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 CLNKQ7Z7G1 428 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 FBXO39Q8N4B4 442 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 ARL14Q8N4G2 192 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 TEX9Q8N6V9 391 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 OR10G6Q8NH81 332 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 SETD7Q8WTS6 366 aaKnown RBP12□□□□□ -0.49
PABPC1-219ENST00000522387 LOXL4Q96JB6 756 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 PRRX2Q99811 253 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 TRIM54Q9BYV2 358 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 SAR1AQ9NR31 198 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 KLHL42Q9P2K6 505 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 LNPEPQ9UIQ6 1025 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 OARD1Q9Y530 152 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 CNOT1A5YKK6 2376 aaKnown RBP12□□□□□ -0.49
PABPC1-219ENST00000522387 CPED1A4D0V7 1026 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 EIF4E1BA6NMX2 242 aaKnown RBP12□□□□□ -0.49
PABPC1-219ENST00000522387 PPP6CO00743 305 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 SIGLEC6O43699 453 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 NOBOXO60393 691 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 CCNT2O60583 730 aaKnown RBP12□□□□□ -0.49
PABPC1-219ENST00000522387 ENTPD5O75356 428 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 PSMB5P28074 263 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 GCKP35557 465 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 BST1Q10588 318 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 NUDCD3Q8IVD9 361 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 SLC35F3Q8IY50 421 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 Q8N9G6 341 aaPredicted RBP12□□□□□ -0.49
PABPC1-219ENST00000522387 RHEBL1Q8TAI7 183 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 WWOXQ9NZC7 414 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 PCDH15Q96QU1 1955 aa12□□□□□ -0.49
PABPC1-219ENST00000522387 CDX4O14627 284 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-219ENST00000522387 TAPBPO15533 448 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 HNRNPCL1O60812 293 aaKnown RBP11.99□□□□□ -0.49
PABPC1-219ENST00000522387 KCNJ13O60928 360 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 SMIM24O75264 130 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 LYPLA1O75608 230 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-219ENST00000522387 SUPT7LO94864 414 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 ANXA5P08758 320 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 ZNF806P0C7X5 589 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 IMPA1P29218 277 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 EEF1DP29692 281 aaKnown RBP11.99□□□□□ -0.49
PABPC1-219ENST00000522387 RXRGP48443 463 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 KPNA2P52292 529 aaKnown RBP11.99□□□□□ -0.49
PABPC1-219ENST00000522387 NAE1Q13564 534 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 GRB7Q14451 532 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 ZNF423Q2M1K9 1284 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 PTCHD3Q3KNS1 767 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 THEMIS2Q5TEJ8 643 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 NKAIN2Q5VXU1 208 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 IL27RAQ6UWB1 636 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 ATG14Q6ZNE5 492 aa11.99□□□□□ -0.49
PABPC1-219ENST00000522387 NEK10Q6ZWH5 1172 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms