RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TRAF3Q13114 568 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TBX2Q13207 712 aaPredicted RBP3.22□□□□□ -1.89
VPS13B-209ENST00000521559 GPR17Q13304 367 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 KCNC3Q14003 757 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 MAPRE1Q15691 268 aaKnown RBP3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TCEAL5Q5H9L2 206 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 NAA35Q5VZE5 725 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TPGS2Q68CL5 300 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 FAM171BQ6P995 826 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TRIM65Q6PJ69 517 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 SARM1Q6SZW1 724 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 IL20RBQ6UXL0 311 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TMEM184AQ6ZMB5 413 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 Q7L0L9 218 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ADGRD2Q7Z7M1 963 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 EXOC3L1Q86VI1 746 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 DENND6AQ8IWF6 608 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TEX19Q8NA77 164 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ATAD1Q8NBU5 361 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 NEK11Q8NG66 645 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 OR10T2Q8NGX3 314 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF461Q8TAF7 563 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 C2orf15Q8WU43 125 aaKnown RBP3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TMEM170AQ8WVE7 144 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 SHC3Q92529 594 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 NR4A3Q92570 626 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 HSPH1Q92598 858 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 CASP10Q92851 521 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 MTBPQ96DY7 904 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 HES6Q96HZ4 224 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ADGRG7Q96K78 797 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 GUCD1Q96NT3 240 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 PKMYT1Q99640 499 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 SYT15Q9BQS2 421 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 NUP58Q9BVL2 599 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 EDEM3Q9BZQ6 932 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ELOVL4Q9GZR5 314 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 CTDSP1Q9GZU7 261 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 GANQ9H2C0 597 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 PLEKHA4Q9H4M7 779 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 CXorf56Q9H5V9 222 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 MVB12BQ9H7P6 319 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 WDR6Q9NNW5 1121 aaKnown RBP3.22□□□□□ -1.89
VPS13B-209ENST00000521559 CISHQ9NSE2 258 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 SPATS2LQ9NUQ6 558 aaKnown RBP3.22□□□□□ -1.89
VPS13B-209ENST00000521559 TMEM51Q9NW97 253 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 IFNKQ9P0W0 207 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 GCNT4Q9P109 453 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 PDP2Q9P2J9 529 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 NLKQ9UBE8 527 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF69Q9UC07 566 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 KCNG2Q9UJ96 466 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 DNAJC12Q9UKB3 198 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 CRYL1Q9Y2S2 319 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 NME7Q9Y5B8 376 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 NFS1Q9Y697 457 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ALPK3Q96L96 1907 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 PCNTO95613 3336 aa3.22□□□□□ -1.89
VPS13B-209ENST00000521559 ARID2Q68CP9 1835 aa3.21□□□□□ -1.89
VPS13B-209ENST00000521559 MYH15Q9Y2K3 1946 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 DYTNA2CJ06 578 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 MTMR11A4FU01 709 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 PRRG1O14668 218 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 EPHB6O15197 1021 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 AP5Z1O43299 807 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 HCRTO43612 131 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 GAGE7O76087 117 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 MTA2O94776 668 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 CSPG5O95196 566 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 SEC24AO95486 1093 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 VNN2O95498 520 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 CH25HO95992 272 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 CHRM4P08173 479 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 PAEPP09466 180 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 HNRNPA1P09651 372 aaKnown RBP eCLIP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 OR4Q2P0C623 313 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 GAGE12FP0CL80 117 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 GAGE12GP0CL81 117 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 GAGE12IP0CL82 117 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 HAPLN1P10915 354 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 VDRP11473 427 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 KRT5P13647 590 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 FOSL2P15408 326 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 EPCAMP16422 314 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 HOXB8P17481 243 aaPredicted RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 CTPS1P17812 591 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 CD58P19256 250 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 TRIM21P19474 475 aaKnown RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ACAT1P24752 427 aaKnown RBP3.21□□□□□ -1.9
VPS13B-209ENST00000521559 HOXA9P31269 272 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 FMO4P31512 558 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 DCTDP32321 178 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 ELF1P32519 619 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 CA8P35219 290 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 HNF1BP35680 557 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 PGM1P36871 562 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 GPD2P43304 727 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 MAGEA11P43364 429 aa3.21□□□□□ -1.9
VPS13B-209ENST00000521559 NRIP1P48552 1158 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms