RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CCDC171Q6TFL3 1326 aa3.09□□□□□ -1.91
HMGB1P41-201ENST00000520234 KIF20BQ96Q89 1820 aa3.09□□□□□ -1.92
HMGB1P41-201ENST00000520234 FLT4P35916 1363 aa3.09□□□□□ -1.92
HMGB1P41-201ENST00000520234 ANKARQ7Z5J8 1434 aa3.09□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLIT1O75093 1534 aa3.09□□□□□ -1.92
HMGB1P41-201ENST00000520234 NRKQ7Z2Y5 1582 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 DIP2BQ9P265 1576 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 RIMBP3CA6NJZ7 1639 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 RIMBP3BA6NNM3 1639 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 RIMBP3Q9UFD9 1639 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 RGPD1P0DJD0 1748 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 MAP2P11137 1827 aaKnown RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 A0A0B4J293 547 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 TEX13DA0A0J9YY54 714 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 TCRBV21S2A2A0A5A6 115 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 FAM72CH0Y354 149 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 ADAM20O43506 726 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 MED24O75448 989 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 ZWINTO95229 277 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLU7O95391 586 aaKnown RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 CAVIN2O95810 425 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 PRSS1P07477 247 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 FGF5P12034 268 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 PSMC4P43686 418 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 UBE2HP62256 183 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 RPS18P62269 152 aaKnown RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 UBXN2AP68543 259 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 MBTD1Q05BQ5 628 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 ZKSCAN8Q15776 578 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 CBWD6Q4V339 395 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 CBWD3Q5JTY5 395 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 MFSD4BQ5TF39 518 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 FAM72AQ5TYM5 149 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 FAM72DQ6L9T8 149 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLC27A1Q6PCB7 646 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 MCM10Q7L590 875 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 G2E3Q7L622 706 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 KRT74Q7RTS7 529 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC186Q7Z3E2 898 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC91Q7Z6B0 441 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 ADIPOR2Q86V24 386 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 FAM72BQ86X60 149 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 C10orf67Q8IYJ2 551 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCAR2Q8N163 923 aaKnown RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC89Q8N998 374 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 CCDC191Q8NCU4 936 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 OR10S1Q8NGN2 331 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 EXD1Q8NHP7 514 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 SNRNP27Q8WVK2 155 aaKnown RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 DNASE2BQ8WZ79 361 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 ITFG2Q969R8 447 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 WBP1Q96G27 269 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 PRMT6Q96LA8 375 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 C16orf45Q96MC5 204 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 ZNF582Q96NG8 517 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 MS4A10Q96PG2 267 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 C16orf70Q9BSU1 422 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 TEX13AQ9BXU3 409 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 FUT8Q9BYC5 575 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 LRRCC1Q9C099 1032 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 ALDH8A1Q9H2A2 487 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 NPAP1Q9NZP6 1156 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 IL17BQ9UHF5 180 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 NRBP1Q9UHY1 535 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 TCF19Q9Y242 345 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 MAGED1Q9Y5V3 778 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 DLG5Q8TDM6 1919 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 USP42Q9H9J4 1324 aaKnown RBP3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 TMEM94Q12767 1356 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 CEMIPQ8WUJ3 1361 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 HEG1Q9ULI3 1381 aa3.08□□□□□ -1.92
HMGB1P41-201ENST00000520234 MON2Q7Z3U7 1717 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 AKAP12Q02952 1782 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 MYO5BQ9ULV0 1848 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 CACNA1FO60840 1977 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 PRSS51A0A1B0GVH4 220 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 hCG_1809904A0A1W2PP81 198 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 A0A1W2PPE2 198 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 A0A1W2PR64 198 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 HEPACAM2A8MVW5 462 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 H3BQF6 201 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 KIF2AO00139 706 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 FIBPO43427 364 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 NEMFO60524 1076 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLC22A3O75751 556 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 UMODP07911 640 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 ABCB1P08183 1280 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 AKR1B1P15121 316 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 CKMT2P17540 419 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 MSH3P20585 1137 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 IL11P20809 199 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 SLC6A6P31641 620 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 HSPA4P34932 840 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 FNTAP49354 379 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 TPM4P67936 248 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 HYAL1Q12794 435 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 TTC31Q49AM3 519 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 BEND3Q5T5X7 828 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 TRIM65Q6PJ69 517 aa3.07□□□□□ -1.92
HMGB1P41-201ENST00000520234 DENND5BQ6ZUT9 1274 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms