RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PTCHD3Q3KNS1 767 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 METTL2BQ6P1Q9 378 aaKnown RBP17.22■□□□□ 0.35
SDC2-205ENST00000520233 RAB44Q7Z6P3 723 aaPredicted RBP17.22■□□□□ 0.35
SDC2-205ENST00000520233 Q8N9G6 341 aaPredicted RBP17.22■□□□□ 0.35
SDC2-205ENST00000520233 LMNTD1Q8N9Z9 388 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 PPFIBP2Q8ND30 876 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 PHF21BQ96EK2 531 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 AHCYL2Q96HN2 611 aaKnown RBP17.22■□□□□ 0.35
SDC2-205ENST00000520233 SGPP1Q9BX95 441 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 CD244Q9BZW8 370 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 CCDC177Q9NQR7 707 aaPredicted RBP17.22■□□□□ 0.35
SDC2-205ENST00000520233 HRASLS2Q9NWW9 162 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 ARID1BQ8NFD5 2236 aaPredicted RBP17.22■□□□□ 0.35
SDC2-205ENST00000520233 A0A1W2PPV9 198 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 PIPSLA2A3N6 862 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 MATN2O00339 956 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 DUX1O43812 170 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 PRICKLE3O43900 615 aaPredicted RBP17.21■□□□□ 0.35
SDC2-205ENST00000520233 STK16O75716 305 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 TYRP1P17643 537 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 POLR2CP19387 275 aaPredicted RBP17.21■□□□□ 0.35
SDC2-205ENST00000520233 NR1D1P20393 614 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 OAS2P29728 719 aaKnown RBP17.21■□□□□ 0.35
SDC2-205ENST00000520233 CAPZBP47756 277 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 HSPA7P48741 367 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 ACADVLP49748 655 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 PRKAA2P54646 552 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 TBPL1P62380 186 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 PRKAA1Q13131 559 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 SQSTM1Q13501 440 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 KIR2DS3Q14952 304 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 FBXO48Q5FWF7 155 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 CAPN13Q6MZZ7 669 aaPredicted RBP17.21■□□□□ 0.35
SDC2-205ENST00000520233 SUSD1Q6UWL2 747 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 C2orf73Q8N5S3 287 aaPredicted RBP17.21■□□□□ 0.35
SDC2-205ENST00000520233 RSC1A1Q92681 617 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 SLC22A18Q96BI1 424 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 MED8Q96G25 268 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 RAB33BQ9H082 229 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 SLC32A1Q9H598 525 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 OXSMQ9NWU1 459 aa17.21■□□□□ 0.35
SDC2-205ENST00000520233 C2orf74A8MZ97 194 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 BIRC5O15392 142 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 BPGMP07738 259 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 IMPDH1P20839 514 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 CSRP1P21291 193 aaKnown RBP17.2■□□□□ 0.34
SDC2-205ENST00000520233 KCNA4P22459 653 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 CD1CP29017 333 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 EEF1DP29692 281 aaKnown RBP17.2■□□□□ 0.34
SDC2-205ENST00000520233 PEBP1P30086 187 aaKnown RBP17.2■□□□□ 0.34
SDC2-205ENST00000520233 ALDH3A1P30838 453 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 SERPINB4P48594 390 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 AGTR2P50052 363 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 DNAJB13P59910 316 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 ILKQ13418 452 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 TSTA3Q13630 321 aaPredicted RBP17.2■□□□□ 0.34
SDC2-205ENST00000520233 TRIP6Q15654 476 aaKnown RBP17.2■□□□□ 0.34
SDC2-205ENST00000520233 AMZ1Q400G9 498 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 HHATQ5VTY9 493 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 ARMC6Q6NXE6 501 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 GLRX5Q86SX6 157 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 TAX1BP1Q86VP1 789 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 C10orf107Q8IVU9 208 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 ESAMQ96AP7 390 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 PYCR2Q96C36 320 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 L3HYPDHQ96EM0 354 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 C1QTNF3Q9BXJ4 246 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 PCBD2Q9H0N5 130 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 LRRN3Q9H3W5 708 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 INTS7Q9NVH2 962 aaKnown RBP17.2■□□□□ 0.34
SDC2-205ENST00000520233 SPHK1Q9NYA1 384 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 ACTR10Q9NZ32 417 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 EPHA6Q9UF33 1036 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 PCDHB11Q9Y5F2 797 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 VPS13AQ96RL7 3174 aa17.2■□□□□ 0.34
SDC2-205ENST00000520233 GSAPA4D1B5 854 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 ISM1B1AKI9 464 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 SLC30A4O14863 429 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 TM4SF5O14894 197 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 CCNT2O60583 730 aaKnown RBP17.19■□□□□ 0.34
SDC2-205ENST00000520233 WDR47O94967 919 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 SIX3O95343 332 aaPredicted RBP17.19■□□□□ 0.34
SDC2-205ENST00000520233 RPLP0P05388 317 aaKnown RBP17.19■□□□□ 0.34
SDC2-205ENST00000520233 GDF5P43026 501 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 PPM1FP49593 454 aaPredicted RBP17.19■□□□□ 0.34
SDC2-205ENST00000520233 WDR4P57081 412 aaKnown RBP17.19■□□□□ 0.34
SDC2-205ENST00000520233 HERVK_113P63132 956 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 CCL7P80098 99 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 ASPHQ12797 758 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 CLPPQ16740 277 aaPredicted RBP17.19■□□□□ 0.34
SDC2-205ENST00000520233 PRAMEF13Q5VWM6 474 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 NKAIN2Q5VXU1 208 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 LIPMQ5VYY2 423 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 LCTLQ6UWM7 567 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 LRRC70Q7Z2Q7 622 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 THOC6Q86W42 341 aaKnown RBP17.19■□□□□ 0.34
SDC2-205ENST00000520233 DEFB124Q8NES8 71 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 OR2A1Q8NGT9 310 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 FLVCR1-AS1Q8TAF5 88 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 MDM1Q8TC05 714 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms