RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 MAGEC3Q8TD91 643 aa14.08□□□□□ -0.16
CLN8-204ENST00000519254 OR1E3Q8WZA6 343 aa14.08□□□□□ -0.16
CLN8-204ENST00000519254 HIST1H2AHQ96KK5 128 aa14.08□□□□□ -0.16
CLN8-204ENST00000519254 NPAS2Q99743 824 aa14.08□□□□□ -0.16
CLN8-204ENST00000519254 HIST1H2AJQ99878 128 aa14.08□□□□□ -0.16
CLN8-204ENST00000519254 H2AFJQ9BTM1 129 aa14.08□□□□□ -0.16
CLN8-204ENST00000519254 NKX1-2Q9UD57 310 aaPredicted RBP14.08□□□□□ -0.16
CLN8-204ENST00000519254 KLQ9UEF7 1012 aa14.08□□□□□ -0.16
CLN8-204ENST00000519254 MGAT4DA6NG13 374 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 FBP2O00757 339 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 SORBS2O94875 1100 aaKnown RBP14.07□□□□□ -0.16
CLN8-204ENST00000519254 HOXC4P09017 264 aaPredicted RBP14.07□□□□□ -0.16
CLN8-204ENST00000519254 STX1BP61266 288 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 YPEL5P62699 121 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 MAPRE2Q15555 327 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 WDR5BQ86VZ2 330 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 SLC22A18ASQ8N1D0 253 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 SFRP1Q8N474 314 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 CHCHD4Q8N4Q1 142 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 FBXL6Q8N531 539 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 HM13Q8TCT9 377 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 TSACCQ96A04 125 aaPredicted RBP14.07□□□□□ -0.16
CLN8-204ENST00000519254 LINC00615Q96LM1 132 aaPredicted RBP14.07□□□□□ -0.16
CLN8-204ENST00000519254 OSGEPL1Q9H4B0 414 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 RMI1Q9H9A7 625 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 RNPEPL1Q9HAU8 725 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 PFDN4Q9NQP4 134 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 SDR39U1Q9NRG7 319 aaPredicted RBP14.07□□□□□ -0.16
CLN8-204ENST00000519254 KCNK6Q9Y257 313 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 RNF11Q9Y3C5 154 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 PLEKHM1Q9Y4G2 1056 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 GPR45Q9Y5Y3 372 aa14.07□□□□□ -0.16
CLN8-204ENST00000519254 CCDC163A0A0D9SF12 145 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 LIN7AO14910 233 aaPredicted RBP14.06□□□□□ -0.16
CLN8-204ENST00000519254 PDE5AO76074 875 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 SNRPB2P08579 225 aaKnown RBP14.06□□□□□ -0.16
CLN8-204ENST00000519254 EBLN1P0CF75 366 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 HMOX2P30519 316 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 PIK3CGP48736 1102 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 MRPL19P49406 292 aaKnown RBP14.06□□□□□ -0.16
CLN8-204ENST00000519254 DIO3P55073 304 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 ABRAXAS2Q15018 415 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 GSTA3Q16772 222 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 KIF19Q2TAC6 998 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 PTCHD3Q3KNS1 767 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 PYCR3Q53H96 274 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.06□□□□□ -0.16
CLN8-204ENST00000519254 C6orf136Q5SQH8 315 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 IL27RAQ6UWB1 636 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 C16orf89Q6UX73 402 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 RIPOR1Q6ZS17 1223 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 LRRC70Q7Z2Q7 622 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 MIER2Q8N344 545 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 EFCAB3Q8N7B9 438 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 FBXL8Q96CD0 374 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 KLHDC7BQ96G42 594 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 OR2M4Q96R27 311 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 RIC8BQ9NVN3 520 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 TRPS1Q9UHF7 1281 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 L3MBTL1Q9Y468 752 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 CCL27Q9Y4X3 112 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 CEP192Q8TEP8 1941 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 C17orf113A0A1B0GUU1 675 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 FAM86C2PA6NEL3 165 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 H3BM21 787 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 CIB2O75838 187 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 IDO1P14902 403 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 NME5P56597 212 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 SRP54P61011 504 aaKnown RBP14.06□□□□□ -0.16
CLN8-204ENST00000519254 ERVK-8P63133 956 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 STX5Q13190 355 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 ART3Q13508 389 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 TRMT5Q32P41 509 aaKnown RBP14.06□□□□□ -0.16
CLN8-204ENST00000519254 CCSMST1Q4G0I0 132 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 RNF165Q6ZSG1 346 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 LPCAT2Q7L5N7 544 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 HID1Q8IV36 788 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 PGAM4Q8N0Y7 254 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 FBXW8Q8N3Y1 598 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 OXR1Q8N573 874 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 ENDOVQ8N8Q3 282 aaKnown RBP14.06□□□□□ -0.16
CLN8-204ENST00000519254 PYCR2Q96C36 320 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 HBEGFQ99075 208 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 SLC25A23Q9BV35 468 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 MRPL1Q9BYD6 325 aaKnown RBP14.06□□□□□ -0.16
CLN8-204ENST00000519254 CAAP1Q9H8G2 361 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 WDR41Q9HAD4 459 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 AIG1Q9NVV5 245 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 PNMA8BQ9ULN7 279 aaPredicted RBP14.06□□□□□ -0.16
CLN8-204ENST00000519254 PSMD13Q9UNM6 376 aa14.06□□□□□ -0.16
CLN8-204ENST00000519254 ABCA7Q8IZY2 2146 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 MUC3AQ02505 3323 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 PABPN1LA6NDY0 278 aaKnown RBP14.05□□□□□ -0.16
CLN8-204ENST00000519254 TOR1BO14657 336 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 FFAR3O14843 346 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 GPR42O15529 346 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 WDR47O94967 919 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 RASGRP1O95267 797 aa14.05□□□□□ -0.16
CLN8-204ENST00000519254 RPL10P27635 214 aaKnown RBP14.05□□□□□ -0.16
CLN8-204ENST00000519254 CD38P28907 300 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms