RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 CHRM5P08912 532 aaPredicted RBP9.17□□□□□ -0.94
CLN8-203ENST00000518780 SBK3P0C264 359 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 IMPDH1P20839 514 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 CD1CP29017 333 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 OAS2P29728 719 aaKnown RBP9.17□□□□□ -0.94
CLN8-203ENST00000518780 RPA3P35244 121 aaPredicted RBP9.17□□□□□ -0.94
CLN8-203ENST00000518780 ETV4P43268 484 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 CAPZBP47756 277 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 SLC6A12P48065 614 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 ACADVLP49748 655 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 PCDH1Q08174 1060 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 NAE1Q13564 534 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 SETDB1Q15047 1291 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 PFKFB4Q16877 469 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 SLC5A12Q1EHB4 618 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 CCSMST1Q4G0I0 132 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 TTMPQ5BVD1 217 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 C16orf46Q6P387 395 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 LRRC70Q7Z2Q7 622 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 SFTPA2Q8IWL1 248 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 LRRC56Q8IYG6 542 aaPredicted RBP9.17□□□□□ -0.94
CLN8-203ENST00000518780 KIAA2013Q8IYS2 634 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 ADGRF3Q8IZF5 1079 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 CACTIN-AS1Q8N1I8 211 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 CCDC63Q8NA47 563 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 DENND1AQ8TEH3 1009 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 MAGEB10Q96LZ2 347 aaPredicted RBP9.17□□□□□ -0.94
CLN8-203ENST00000518780 CCDC3Q9BQI4 270 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 RTKNQ9BST9 563 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 CD244Q9BZW8 370 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 UNKQ9C0B0 810 aaKnown RBP9.17□□□□□ -0.94
CLN8-203ENST00000518780 ABCG4Q9H172 646 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 LRRN3Q9H3W5 708 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 OXSMQ9NWU1 459 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 WWOXQ9NZC7 414 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 CPSF2Q9P2I0 782 aaKnown RBP9.17□□□□□ -0.94
CLN8-203ENST00000518780 CDV3Q9UKY7 258 aaKnown RBP9.17□□□□□ -0.94
CLN8-203ENST00000518780 EMCNQ9ULC0 261 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 STK38LQ9Y2H1 464 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 KLK4Q9Y5K2 254 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 KCNE2Q9Y6J6 123 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 FAM186AA6NE01 2351 aa9.17□□□□□ -0.94
CLN8-203ENST00000518780 PTPRZ1P23471 2315 aaPredicted RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 PIKFYVEQ9Y2I7 2098 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 PRAMEF33A0A0G2JMD5 474 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 A8MT66 165 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 G3V2L1 256 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 K7EPI3 171 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 BTN3A3O00478 584 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 NTN3O00634 580 aaPredicted RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 MAP3K7O43318 606 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 PRICKLE3O43900 615 aaPredicted RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 DLX3O60479 287 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 TRIM13O60858 407 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 RFPL3O75679 317 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 TOP3BO95985 862 aaKnown RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 C9P02748 559 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 DHRS4L1P0CG22 281 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 CREB1P16220 341 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 GNAZP19086 355 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 SERPINB5P36952 375 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 GMPRP36959 345 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 OR1D5P58170 312 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 HERVK_113P63132 956 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 PPP2R2AP63151 447 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 RELAQ04206 551 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 PRDX1Q06830 199 aaKnown RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 TRA2AQ13595 282 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLN8-203ENST00000518780 PTCHD3Q3KNS1 767 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 LIPMQ5VYY2 423 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 TMEM71Q6P5X7 295 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 LCTLQ6UWM7 567 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 KMT5CQ86Y97 462 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 TRIM42Q8IWZ5 723 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 PTGR2Q8N8N7 351 aaPredicted RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 LMNTD1Q8N9Z9 388 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 LINC01555Q8NAE3 123 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 ARMC2Q8NEN0 867 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 OR4D9Q8NGE8 314 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 RAB3IL1Q8TBN0 382 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 ZUFSPQ96AP4 578 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 FAM122AQ96E09 287 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 L3HYPDHQ96EM0 354 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 FAM111AQ96PZ2 611 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 TRMOQ9BU70 441 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 TBC1D10AQ9BXI6 508 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 ERVK-6Q9BXR3 956 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 PITHD1Q9GZP4 211 aaPredicted RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 CHRNA10Q9GZZ6 450 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 XKR8Q9H6D3 395 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 C1GALT1Q9NS00 363 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 DNAJC11Q9NVH1 559 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 INTS7Q9NVH2 962 aaKnown RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 ACTR10Q9NZ32 417 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 SEMA5BQ9P283 1151 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 PDP2Q9P2J9 529 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 ANKMY1Q9P2S6 941 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 OPTCQ9UBM4 332 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 RAPGEFL1Q9UHV5 662 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 POMT2Q9UKY4 750 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms