RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 RPL10LQ96L21 214 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 C1orf74Q96LT6 269 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ARNT2Q9HBZ2 717 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 TMEM248Q9NWD8 314 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 SMPD4Q9NXE4 827 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 KCTD5Q9NXV2 234 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 DYRK1BQ9Y463 629 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 COL24A1Q17RW2 1714 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 IRGMA1A4Y4 181 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 FADS2P1A8MWK0 482 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 HNRNPCL2B2RXH8 293 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 TARM1B6A8C7 271 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 CLIC1O00299 241 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ARSAP15289 507 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 PRPS1L1P21108 318 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 TACR2P21452 398 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ADRA1AP35348 466 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ATP5C1P36542 298 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 TUSC3Q13454 348 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 BOP1Q14137 746 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 IQCCQ4KMZ1 466 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 IFI44LQ53G44 452 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 DDI2Q5TDH0 399 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 KDELC1Q6UW63 502 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 FAM151BQ6UXP7 276 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 CTU1Q7Z7A3 348 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ZNF675Q8TD23 568 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ATL1Q8WXF7 558 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 EMID1Q96A84 441 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 SPACA7Q96KW9 195 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 KCNC2Q96PR1 638 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 CAMKK2Q96RR4 588 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 BRINP2Q9C0B6 783 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 CIPCQ9C0C6 399 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 TPK1Q9H3S4 243 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 SERHL2Q9H4I8 314 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 SERHLQ9NQF3 203 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 MIEF1Q9NQG6 463 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 TRPM5Q9NZQ8 1165 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 FABP12A6NFH5 140 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 MANBAO00462 879 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 BTN3A3O00478 584 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 NDUFB5O43674 189 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 CLDN11O75508 207 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ZBTB7AO95365 584 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 AQP1P29972 269 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 NKX2-5P52952 324 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 CDH12P55289 794 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 SMU1Q2TAY7 513 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ZNF367Q7RTV3 350 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 LACC1Q8IV20 430 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 PHACTR4Q8IZ21 702 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 TEFMQ96QE5 360 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 EMILIN2Q9BXX0 1053 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 TP63Q9H3D4 680 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 POLR3BQ9NW08 1133 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 PHF11Q9UIL8 331 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 DNMT3LQ9UJW3 386 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 WNK3Q9BYP7 1800 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 A0A0G2JLL6 359 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 A0A1W2PQ72 361 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 MOXD2PA6NHM9 499 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 CLDN24A6NM45 220 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 KPNA5O15131 536 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ADAM23O75077 832 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 CCNB2O95067 398 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 NR4A2P43354 598 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ALDH9A1P49189 494 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 RPP38P78345 283 aaKnown RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 DUOXA1Q1HG43 343 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ZNF284Q2VY69 593 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 SDHAF4Q5VUM1 108 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 XKRXQ6PP77 449 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 GPRIN1Q7Z2K8 1008 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 PRRT2Q7Z6L0 340 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 OR4A15Q8NGL6 344 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 LILRB4Q8NHJ6 448 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 PPP1R13LQ8WUF5 828 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 RNFT2Q96EX2 444 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 HSH2DQ96JZ2 352 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 PSD2Q9BQI7 771 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 TMEM246Q9BRR3 403 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 ABCG8Q9H221 673 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 HEBP1Q9NRV9 189 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 SNTG1Q9NSN8 517 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 DNAJC11Q9NVH1 559 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 MIOSQ9NXC5 875 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 RIMKLBQ9ULI2 386 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 PCDHB9Q9Y5E1 797 aa6.51□□□□□ -1.37
CPNE3-203ENST00000517490 MAGED1Q9Y5V3 778 aaPredicted RBP6.51□□□□□ -1.37
CPNE3-203ENST00000517490 PDHXO00330 501 aa6.5□□□□□ -1.37
CPNE3-203ENST00000517490 UBFD1O14562 309 aaKnown RBP6.5□□□□□ -1.37
CPNE3-203ENST00000517490 AP2A2O94973 939 aa6.5□□□□□ -1.37
CPNE3-203ENST00000517490 EBLN1P0CF75 366 aa6.5□□□□□ -1.37
CPNE3-203ENST00000517490 ENGP17813 658 aa6.5□□□□□ -1.37
CPNE3-203ENST00000517490 IDUAP35475 653 aa6.5□□□□□ -1.37
CPNE3-203ENST00000517490 RPS3AP61247 264 aaKnown RBP6.5□□□□□ -1.37
CPNE3-203ENST00000517490 HSPA14Q0VDF9 509 aa6.5□□□□□ -1.37
CPNE3-203ENST00000517490 PTGR1Q14914 329 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms