RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 TMEM170AQ8WVE7 144 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PROX1Q92786 737 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 VSIG2Q96IQ7 327 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 C10orf90Q96M02 699 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MCCC1Q96RQ3 725 aaPredicted RBP-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SMAD5Q99717 465 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 EIF2AK1Q9BQI3 630 aaKnown RBP-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FAM167BQ9BTA0 163 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KIFC3Q9BVG8 833 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ST6GALNAC5Q9BVH7 336 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 HDHD5Q9BXW7 423 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RACGAP1Q9H0H5 632 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KCNN2Q9H2S1 579 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CXorf56Q9H5V9 222 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PARP11Q9NR21 331 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 GGA3Q9NZ52 723 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR6C2Q9NZP2 312 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ARMCX1Q9P291 453 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 LNPEPQ9UIQ6 1025 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SERPINB13Q9UIV8 391 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MID2Q9UJV3 735 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DHDHQ9UQ10 334 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CA5BQ9Y2D0 317 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PPP2R2CQ9Y2T4 447 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 STON1Q9Y6Q2 735 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PIEZO1Q92508 2521 aa-0.94□□□□□ -2.56
RNU6-1238P-201ENST00000517215 LOC105369274A0A096LPK9 316 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 LOC102723532A0A0G2JNH3 316 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FAM149AA5PLN7 773 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TRIM43BA6NCK2 446 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR2W5A6NFC9 320 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ISM1B1AKI9 464 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NPIPB9F8W1W9 429 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 K7EQG2 157 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DNASE2O00115 360 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 WDR46O15213 610 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SPINT2O43291 252 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SLC25A17O43808 307 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KLK8O60259 260 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 IGSF3O75054 1194 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SERF1AO75920 110 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MMP1P03956 469 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CYC1P08574 325 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ITGA5P08648 1049 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KRT19P08727 400 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SLC2A2P11168 524 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 AOC1P19801 751 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 AKAP5P24588 427 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NPY1RP25929 384 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RYKP34925 604 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NSFP46459 744 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CCR3P51677 355 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CSNK2A1P68400 391 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DHODHQ02127 395 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FOXM1Q08050 763 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 BIRC3Q13489 604 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 FASTKQ14296 549 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DHX8Q14562 1220 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NONOQ15233 471 aaKnown RBP eCLIP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TAB1Q15750 504 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RPE65Q16518 533 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NTRK2Q16620 822 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DECR1Q16698 335 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 UAP1L1Q3KQV9 507 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PDLIM3Q53GG5 364 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SOWAHCQ53LP3 525 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 COBLL1Q53SF7 1204 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 C2orf27AQ580R0 203 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PIGGQ5H8A4 983 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ZNF684Q5T5D7 378 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 METTL2BQ6P1Q9 378 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DUS1LQ6P1R4 473 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 MTFR2Q6P444 385 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 NOL8Q76FK4 1167 aaKnown RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ZNF554Q86TJ5 538 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 LDB1Q86U70 411 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RPAINQ86UA6 219 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 VSIG1Q86XK7 387 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 ZNF677Q86XU0 584 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 PTOV1Q86YD1 416 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DENND1CQ8IV53 801 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR4N4Q8N0Y3 316 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 GBGT1Q8N5D6 347 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 SLC5A8Q8N695 610 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DCAF4L2Q8NA75 395 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CSNK2A3Q8NEV1 391 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR52B6Q8NGF0 335 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR5T2Q8NGG2 359 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 OR1J1Q8NGS3 322 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 HMGCLL1Q8TB92 370 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RAET1EQ8TD07 263 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KLF14Q8TD94 323 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 CSGALNACT1Q8TDX6 532 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 C2CD4CQ8TF44 421 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 RUFY2Q8WXA3 655 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 DNAAF4Q8WXU2 420 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 STARD8Q92502 1023 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 KRT35Q92764 455 aa-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 TRIM43Q96BQ3 446 aaPredicted RBP-0.95□□□□□ -2.56
RNU6-1238P-201ENST00000517215 METTL2AQ96IZ6 378 aaKnown RBP-0.95□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms