RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ACP2P11117 423 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 EEF2P13639 858 aaKnown RBP-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 ACP5P13686 325 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 CHN1P15882 459 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 PRKAR2BP31323 418 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 SHMT1P34896 483 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 IER3P46695 156 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 TRPC1P48995 793 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 CXCL6P80162 114 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 CHRNDQ07001 517 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 PRKAA1Q13131 559 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 SNTB1Q13884 538 aaKnown RBP-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 TAF13Q15543 124 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 ABCA11PQ4W5N1 156 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 TOR1AIP1Q5JTV8 583 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 HYIQ5T013 277 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 TMEM198Q66K66 360 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 GJB7Q6PEY0 223 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 PAPD4Q6PIY7 484 aaKnown RBP-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 SMARCD3Q6STE5 483 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 IL20RBQ6UXL0 311 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZER1Q7Z7L7 766 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 PAF1Q8N7H5 531 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 L3MBTL4Q8NA19 623 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 KIAA0895Q8NCT3 520 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 NEIL3Q8TAT5 605 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 UTP15Q8TED0 518 aaKnown RBP-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 DNAAF4Q8WXU2 420 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 PABPC5Q96DU9 382 aaKnown RBP-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 TAAR9Q96RI9 348 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 MCCC1Q96RQ3 725 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 MAGEB5Q9BZ81 275 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 NANOGQ9H9S0 305 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZNF287Q9HBT7 754 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 HELLSQ9NRZ9 838 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 ACSS1Q9NUB1 689 aaPredicted RBP-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 OR6C2Q9NZP2 312 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 EPS15L1Q9UBC2 864 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 OGDHLQ9ULD0 1010 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 NFU1Q9UMS0 254 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 IGF2RP11717 2491 aa-1.13□□□□□ -2.59
RNU6-542P-201ENST00000516405 C2orf16Q68DN1 1984 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 IGKV2-24A0A0C4DH68 120 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 RRN3P2A6NIE6 340 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 C15orf62A8K5M9 175 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 TMX2-CTNND1H3BSU7 103 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 HS3ST1O14792 307 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 THAP12O43422 761 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 HBP1O60381 514 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 AVILO75366 819 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 GPC4O75487 556 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 RHBDL1O75783 438 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 MRPL3P09001 348 aaKnown RBP-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 HRH2P25021 359 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 FUSP35637 526 aaKnown RBP eCLIP-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 MAGEB1P43366 347 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 NDST1P52848 882 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 MADCAM1Q13477 382 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 CDH18Q13634 790 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 DCTN1Q14203 1278 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 TNIP1Q15025 636 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 TTF1Q15361 905 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 TAB1Q15750 504 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 FBXO47Q5MNV8 452 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 AGAP6Q5VW22 663 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 LCN10Q6JVE6 187 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 RINT1Q6NUQ1 792 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 EPM2AIP1Q7L775 607 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 LRRC49Q8IUZ0 686 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 SPANXA2-OT1Q8N9U9 137 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 USP38Q8NB14 1042 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 HJURPQ8NCD3 748 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 OR2L8Q8NGY9 312 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 OR52P1PQ8NH57 321 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 HMGB4Q8WW32 186 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 HSPH1Q92598 858 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 TVP23CQ96ET8 276 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 SPAG5Q96R06 1193 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 PLEKHF1Q96S99 279 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 PI4K2AQ9BTU6 479 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 SARGQ9BW04 601 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 NUF2Q9BZD4 464 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 NMUR2Q9GZQ4 415 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 LIN7CQ9NUP9 197 aaKnown RBP-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 BEX4Q9NWD9 120 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 MTMR6Q9Y217 621 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 AMMECR1Q9Y4X0 333 aaPredicted RBP-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 LSM4Q9Y4Z0 139 aaKnown RBP-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 PCDHGB2Q9Y5G2 931 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZFYVE26Q68DK2 2539 aa-1.14□□□□□ -2.59
RNU6-542P-201ENST00000516405 LAMB4A4D0S4 1761 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 FAM90A18PA6NE21 464 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 FAM90A16PA6NEW6 464 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 FAM90A9PA6NNJ1 464 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 FAM90A5PA8MXJ8 464 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 CDC45O75419 566 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 TUSC2O75896 110 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 FAM90A15PP0C7V4 464 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 FAM90A14PP0C7W9 464 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 IGHV4-31P0DP07 118 aa-1.15□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms