RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	TACC1	O75410	805 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	MYOD1	P15172	320 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	DDX5	P17844	614 aa	Known RBP	4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	MAOA	P21397	527 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	ALDH4A1	P30038	563 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	CORO1A	P31146	461 aa	Known RBP	4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	HNRNPH3	P31942	346 aa	Known RBP	4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	UBA7	P41226	1012 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	EFNA5	P52803	228 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	ARL4C	P56559	192 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	ASIC1	P78348	528 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	PDE1B	Q01064	536 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	EFR3A	Q14156	821 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	CCDC96	Q2M329	555 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	LETM2	Q2VYF4	491 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	FILIP1L	Q4L180	1135 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	FBXO47	Q5MNV8	452 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	ATG16L1	Q676U5	607 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	CENPP	Q6IPU0	288 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	TATDN1	Q6P1N9	297 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	TMEM81	Q6P7N7	255 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	WDR59	Q6PJI9	974 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	CYP26C1	Q6V0L0	522 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	FAM114A1	Q8IWE2	563 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	ANKRD20A12P	Q8NF67	263 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	RAD54L	Q92698	747 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	TBC1D20	Q96BZ9	403 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	CNOT6L	Q96LI5	555 aa	Known RBP	4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	ERGIC2	Q96RQ1	377 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	MTERF1	Q99551	399 aa	Known RBP	4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	HEMGN	Q9BXL5	484 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	UBXN6	Q9BZV1	441 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	KCNN2	Q9H2S1	579 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	NDST4	Q9H3R1	872 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	PPP1R3E	Q9H7J1	279 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	FKRP	Q9H9S5	495 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	JMJD4	Q9H9V9	463 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	KCNMB3	Q9NPA1	279 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	EXOC1	Q9NV70	894 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	MTUS1	Q9ULD2	1270 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479		Q9Y3F1	56 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	OR2W1	Q9Y3N9	320 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	LOXL2	Q9Y4K0	774 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	ATP8B3	O60423	1300 aa		4.21	□□□□□ -1.74
RUFY3-215	ENST00000515479	ACACB	O00763	2458 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	ZNF638	Q14966	1978 aa	Known RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	FAM208B	Q5VWN6	2430 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	IGKV3D-15	A0A087WSY6	115 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	GOLGA6L10	A0A0M3HER8	536 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	TTC26	A0AVF1	554 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	MED19	A0JLT2	244 aa	Predicted RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	ASB14	A6NK59	587 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	MPHOSPH10	O00566	681 aa	Known RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	MBTPS2	O43462	519 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	WDR1	O75083	606 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	GJB5	O95377	273 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	LCA5L	O95447	670 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	PGK2	P07205	417 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	TPM1	P09493	284 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	IQCF3	P0C7M6	154 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	CCDC172	P0C7W6	258 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	PNMA6A	P0CW24	399 aa	Predicted RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	BDKRB2	P30411	391 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	HOXA1	P49639	335 aa	Predicted RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	ISL1	P61371	349 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	GNG11	P61952	73 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	LRRC63	Q05C16	580 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	STK4	Q13043	487 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	TUBB2A	Q13885	445 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	CDC37	Q16543	378 aa	Predicted RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	UBE2S	Q16763	222 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	TMEM266	Q2M3C6	531 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	C2orf68	Q2NKX9	166 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	QRICH1	Q2TAL8	776 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	JAKMIP3	Q5VZ66	844 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	KRTAP5-1	Q6L8H4	278 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	METTL2B	Q6P1Q9	378 aa	Known RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	SLC22A25	Q6T423	547 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	CXCL17	Q6UXB2	119 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	TLK2	Q86UE8	772 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	UBALD2	Q8IYN6	164 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	KRT222	Q8N1A0	295 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	GUF1	Q8N442	669 aa	Known RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	CSGALNACT2	Q8N6G5	542 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	MSANTD4	Q8NCY6	345 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	GMCL1P1	Q8NEA9	526 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	MNS1	Q8NEH6	495 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	DBF4B	Q8NFT6	615 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	OR10V1	Q8NGI7	309 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	HUS1B	Q8NHY5	278 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	ETNPPL	Q8TBG4	499 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	AFAP1L1	Q8TED9	768 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	CCDC47	Q96A33	483 aa	Known RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	DNAJC19	Q96DA6	116 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	CALML4	Q96GE6	196 aa		4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	METTL2A	Q96IZ6	378 aa	Known RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	NAP1L4	Q99733	375 aa	Known RBP	4.2	□□□□□ -1.74
RUFY3-215	ENST00000515479	TUBB2B	Q9BVA1	445 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms