RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 WWOXQ9NZC7 414 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 OGFRQ9NZT2 677 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 COPG2Q9UBF2 871 aa20.31■□□□□ 0.84
LSM6-207ENST00000515311 A8MT66 165 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 STX16-NPEPL1H3BU86 382 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 BTN3A3O00478 584 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 STX16O14662 325 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 SLC30A4O14863 429 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 TM4SF5O14894 197 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 TAPBPO15533 448 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 DUX1O43812 170 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 DLX3O60479 287 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 CHRM5P08912 532 aaPredicted RBP20.3■□□□□ 0.84
LSM6-207ENST00000515311 CPA3P15088 417 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 AMD1P17707 334 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 SLC6A12P48065 614 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 KIR2DS3Q14952 304 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 CLPPQ16740 277 aaPredicted RBP20.3■□□□□ 0.84
LSM6-207ENST00000515311 ZXDCQ2QGD7 858 aaPredicted RBP20.3■□□□□ 0.84
LSM6-207ENST00000515311 SLC22A9Q8IVM8 553 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 Q8N9G6 341 aaPredicted RBP20.3■□□□□ 0.84
LSM6-207ENST00000515311 RSC1A1Q92681 617 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 SLC22A18Q96BI1 424 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 AHCYL2Q96HN2 611 aaKnown RBP20.3■□□□□ 0.84
LSM6-207ENST00000515311 SGPP1Q9BX95 441 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 CCDC177Q9NQR7 707 aaPredicted RBP20.3■□□□□ 0.84
LSM6-207ENST00000515311 HRASLS2Q9NWW9 162 aa20.3■□□□□ 0.84
LSM6-207ENST00000515311 TNPO3Q9Y5L0 923 aaKnown RBP20.3■□□□□ 0.84
LSM6-207ENST00000515311 PCM1Q15154 2024 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 PIPSLA2A3N6 862 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 TYRP1P17643 537 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 CD1CP29017 333 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 HPDP32754 393 aaPredicted RBP20.29■□□□□ 0.84
LSM6-207ENST00000515311 TBPL1P62380 186 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 PRKAA1Q13131 559 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 NAE1Q13564 534 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 FASTKQ14296 549 aaKnown RBP20.29■□□□□ 0.84
LSM6-207ENST00000515311 PTCHD3Q3KNS1 767 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 CAPN13Q6MZZ7 669 aaPredicted RBP20.29■□□□□ 0.84
LSM6-207ENST00000515311 WDR74Q6RFH5 385 aaPredicted RBP20.29■□□□□ 0.84
LSM6-207ENST00000515311 PTGR2Q8N8N7 351 aaPredicted RBP20.29■□□□□ 0.84
LSM6-207ENST00000515311 WDR48Q8TAF3 677 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 TMEM79Q9BSE2 394 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 CD244Q9BZW8 370 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 PCBD2Q9H0N5 130 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 ATG10Q9H0Y0 220 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 NKIRAS1Q9NYS0 192 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 EPHA6Q9UF33 1036 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 DMXL1Q9Y485 3027 aa20.29■□□□□ 0.84
LSM6-207ENST00000515311 PTPRZ1P23471 2315 aaPredicted RBP20.28■□□□□ 0.84
LSM6-207ENST00000515311 A0A1W2PPV9 198 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 PCNX2A6NKB5 2137 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 C2orf74A8MZ97 194 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 PRICKLE3O43900 615 aaPredicted RBP20.28■□□□□ 0.84
LSM6-207ENST00000515311 DHRS4L1P0CG22 281 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 PRKAA2P54646 552 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 PCLAFQ15004 111 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 PCBP2Q15366 365 aaKnown RBP eCLIP20.28■□□□□ 0.84
LSM6-207ENST00000515311 TRIP6Q15654 476 aaKnown RBP20.28■□□□□ 0.84
LSM6-207ENST00000515311 ARMC6Q6NXE6 501 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 RAB44Q7Z6P3 723 aaPredicted RBP20.28■□□□□ 0.84
LSM6-207ENST00000515311 PPFIBP2Q8ND30 876 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 DEFB124Q8NES8 71 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 MED8Q96G25 268 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 DPYSL5Q9BPU6 564 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 SELENOSQ9BQE4 189 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 LRRN3Q9H3W5 708 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 OXSMQ9NWU1 459 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 CDV3Q9UKY7 258 aaKnown RBP20.28■□□□□ 0.84
LSM6-207ENST00000515311 PCDHGA1Q9Y5H4 931 aa20.28■□□□□ 0.84
LSM6-207ENST00000515311 CEP250Q9BV73 2442 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 STK16O75716 305 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 FKBP9O95302 570 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 RPLP0P05388 317 aaKnown RBP20.27■□□□□ 0.84
LSM6-207ENST00000515311 POLR2CP19387 275 aaPredicted RBP20.27■□□□□ 0.84
LSM6-207ENST00000515311 SDHBP21912 280 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 OAS2P29728 719 aaKnown RBP20.27■□□□□ 0.84
LSM6-207ENST00000515311 PEBP1P30086 187 aaKnown RBP20.27■□□□□ 0.84
LSM6-207ENST00000515311 SERPINB4P48594 390 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 HSPA7P48741 367 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 AGTR2P50052 363 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 DNAJB13P59910 316 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 HERVK_113P63132 956 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 PPP2R2AP63151 447 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 CCL7P80098 99 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 C18orf21Q32NC0 220 aaPredicted RBP20.27■□□□□ 0.84
LSM6-207ENST00000515311 AMZ1Q400G9 498 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 NKAIN2Q5VXU1 208 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 LRRC70Q7Z2Q7 622 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 PLXDC1Q8IUK5 500 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 C2orf73Q8N5S3 287 aaPredicted RBP20.27■□□□□ 0.84
LSM6-207ENST00000515311 FLVCR1-AS1Q8TAF5 88 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 PYCR2Q96C36 320 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 PHF21BQ96EK2 531 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 L3HYPDHQ96EM0 354 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 C1QTNF3Q9BXJ4 246 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 ERVK-6Q9BXR3 956 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 SPHK1Q9NYA1 384 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 ACTR10Q9NZ32 417 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 POMT2Q9UKY4 750 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms