RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 SKA2Q8WVK7 121 aaPredicted RBP9.92□□□□□ -0.82
SNF8-214ENST00000515174 STMN2Q93045 179 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 SPDL1Q96EA4 605 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 SCARF2Q96GP6 870 aaPredicted RBP9.92□□□□□ -0.82
SNF8-214ENST00000515174 CLPTM1LQ96KA5 538 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 MARK4Q96L34 752 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 FCRL1Q96LA6 429 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 CDK15Q96Q40 435 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 SGPP1Q9BX95 441 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 MKRN2Q9H000 416 aaKnown RBP9.92□□□□□ -0.82
SNF8-214ENST00000515174 OR52A5Q9H2C5 316 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 EHD1Q9H4M9 534 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 ACTR8Q9H981 624 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 BRF2Q9HAW0 419 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 PHPT1Q9NRX4 125 aaPredicted RBP9.92□□□□□ -0.82
SNF8-214ENST00000515174 INTS7Q9NVH2 962 aaKnown RBP9.92□□□□□ -0.82
SNF8-214ENST00000515174 FBXL12Q9NXK8 326 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 MAP10Q9P2G4 905 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 STOML1Q9UBI4 398 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 ABCD2Q9UBJ2 740 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 CD300AQ9UGN4 299 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 CROTQ9UKG9 612 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 ACSL5Q9ULC5 683 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 ZNF490Q9ULM2 529 aaPredicted RBP9.92□□□□□ -0.82
SNF8-214ENST00000515174 DUSP12Q9UNI6 340 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 ZFR2Q9UPR6 939 aaKnown RBP9.92□□□□□ -0.82
SNF8-214ENST00000515174 EIF3LQ9Y262 564 aaKnown RBP9.92□□□□□ -0.82
SNF8-214ENST00000515174 SLC22A14Q9Y267 594 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 PTGDR2Q9Y5Y4 395 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 R4GN57 208 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 EML5Q05BV3 1969 aa9.92□□□□□ -0.82
SNF8-214ENST00000515174 TP53BP1Q12888 1972 aaPredicted RBP9.92□□□□□ -0.82
SNF8-214ENST00000515174 A0A1W2PP55 124 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 PRR19A6NJB7 356 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 TRIM38O00635 465 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 RNASEH2AO75792 299 aaKnown RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 BCAS2O75934 225 aaPredicted RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 EGFP01133 1207 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 RPN2P04844 631 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 ERGP11308 486 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SRFP11831 508 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 MYCLP1P12525 358 aaPredicted RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 HOXB2P14652 356 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 IMPA1P29218 277 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 PDHA2P29803 388 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 HTR6P50406 440 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 HNRNPFP52597 415 aaKnown RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 SEC13P55735 322 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 KCNK10P57789 538 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 AP2B1P63010 937 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SLC34A1Q06495 639 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 CSTF3Q12996 717 aaKnown RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 SGCGQ13326 291 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 CEACAM7Q14002 265 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 TLR1Q15399 786 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 NR6A1Q15406 480 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 RFTN2Q52LD8 501 aaPredicted RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 EOGTQ5NDL2 527 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SAMD4BQ5PRF9 694 aaKnown RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 IRAK1BP1Q5VVH5 260 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 FRG2Q64ET8 278 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 GRHL2Q6ISB3 625 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 KIAA1211LQ6NV74 962 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 ZFP1Q6P2D0 407 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 MBOAT1Q6ZNC8 495 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 LPCAT2Q7L5N7 544 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 PDZD3Q86UT5 571 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 THOC6Q86W42 341 aaKnown RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 HEATR4Q86WZ0 1026 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.91□□□□□ -0.82
SNF8-214ENST00000515174 LRRC56Q8IYG6 542 aaPredicted RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 RGL4Q8IZJ4 473 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 FNDC5Q8NAU1 212 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 GOLM1Q8NBJ4 401 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 PLA2G15Q8NCC3 412 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 DNAJB8Q8NHS0 232 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 RAD51AP1Q96B01 352 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 ERLEC1Q96DZ1 483 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 CMTM7Q96FZ5 175 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 DUS3LQ96G46 650 aaKnown RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 FRG2BQ96QU4 278 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 PKP4Q99569 1192 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 NPAS2Q99743 824 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 TIMM29Q9BSF4 260 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SLC17A9Q9BYT1 436 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 ZDHHC5Q9C0B5 715 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 LRTM1Q9HBL6 345 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SPAG4Q9NPE6 437 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SLC2A4RGQ9NR83 387 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 C1orf109Q9NX04 203 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SIRT5Q9NXA8 310 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SUCOQ9UBS9 1254 aaKnown RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 NKX1-2Q9UD57 310 aaPredicted RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 KLQ9UEF7 1012 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SERGEFQ9UGK8 458 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 LEF1Q9UJU2 399 aaPredicted RBP9.91□□□□□ -0.82
SNF8-214ENST00000515174 PPT2Q9UMR5 302 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 NCKAP1Q9Y2A7 1128 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 SLC17A4Q9Y2C5 497 aa9.91□□□□□ -0.82
SNF8-214ENST00000515174 LRRC42Q9Y546 428 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms