RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ATG14Q6ZNE5 492 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 KLHL7Q8IXQ5 586 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 FAM167BQ9BTA0 163 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 TXLNGQ9NUQ3 528 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 SPATA7Q9P0W8 599 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 FBXO5Q9UKT4 447 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 TCFL5Q9UL49 500 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 PYCARDQ9ULZ3 195 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 SRPK3Q9UPE1 567 aa23.56■■□□□ 1.36
SNF8-213ENST00000514929 SNRNP200O75643 2136 aaKnown RBP23.56■■□□□ 1.36
SNF8-213ENST00000514929 SUV39H1O43463 412 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 RFPL1O75677 317 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 CAPN1P07384 714 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 CLCN7P51798 805 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 DHX9Q08211 1270 aaKnown RBP23.55■■□□□ 1.36
SNF8-213ENST00000514929 NCF4Q15080 339 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 ZNF385CQ66K41 422 aaPredicted RBP23.55■■□□□ 1.36
SNF8-213ENST00000514929 FIGLAQ6QHK4 219 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 KCNMB4Q86W47 210 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 CREG2Q8IUH2 290 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 MCATQ8IVS2 390 aaKnown RBP23.55■■□□□ 1.36
SNF8-213ENST00000514929 HMGCLL1Q8TB92 370 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 PROKR1Q8TCW9 393 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 DENND1AQ8TEH3 1009 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 KCNJ9Q92806 393 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 RUNDC3BQ96NL0 473 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 SLC30A3Q99726 388 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 C17orf62Q9BQA9 187 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 NDC1Q9BTX1 674 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 FAM114A2Q9NRY5 505 aa23.55■■□□□ 1.36
SNF8-213ENST00000514929 IARS2Q9NSE4 1012 aaKnown RBP23.55■■□□□ 1.36
SNF8-213ENST00000514929 HELZ2Q9BYK8 2649 aaKnown RBP23.55■■□□□ 1.36
SNF8-213ENST00000514929 PRICKLE3O43900 615 aaPredicted RBP23.54■■□□□ 1.36
SNF8-213ENST00000514929 CATP04040 527 aaKnown RBP23.54■■□□□ 1.36
SNF8-213ENST00000514929 ATXN8OSP0DMR3 200 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 CBSLP0DN79 551 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 PSMB5P28074 263 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 CBSP35520 551 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 MPP1Q00013 466 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 DR1Q01658 176 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 CRYMQ14894 314 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 LACTB2Q53H82 288 aaPredicted RBP23.54■■□□□ 1.36
SNF8-213ENST00000514929 ZC3H12BQ5HYM0 836 aaKnown RBP23.54■■□□□ 1.36
SNF8-213ENST00000514929 FAM69BQ5VUD6 431 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 ZNF549Q6P9A3 640 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 SYDE1Q6ZW31 735 aaPredicted RBP23.54■■□□□ 1.36
SNF8-213ENST00000514929 APLFQ8IW19 511 aaPredicted RBP23.54■■□□□ 1.36
SNF8-213ENST00000514929 OR9A1PQ8NGU1 263 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 GABPB2Q8TAK5 448 aaPredicted RBP23.54■■□□□ 1.36
SNF8-213ENST00000514929 MIPEPQ99797 713 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 KLHL42Q9P2K6 505 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 DHCR7Q9UBM7 475 aaKnown RBP23.54■■□□□ 1.36
SNF8-213ENST00000514929 GPN3Q9UHW5 284 aaPredicted RBP23.54■■□□□ 1.36
SNF8-213ENST00000514929 PADI2Q9Y2J8 665 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 COMMD10Q9Y6G5 202 aa23.54■■□□□ 1.36
SNF8-213ENST00000514929 ARHGEF33A8MVX0 844 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 PSIP1O75475 530 aaKnown RBP23.53■■□□□ 1.36
SNF8-213ENST00000514929 BANF1O75531 89 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 HAUS5O94927 633 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 TTC4O95801 387 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 GRIA3P42263 894 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 PAFAH1B1P43034 410 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 CUL1Q13616 776 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 CYP2A13Q16696 494 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 BBS9Q3SYG4 887 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.53■■□□□ 1.36
SNF8-213ENST00000514929 MLIPQ5VWP3 458 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 FCRL6Q6DN72 434 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 NEK10Q6ZWH5 1172 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 ZUFSPQ96AP4 578 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 GBP5Q96PP8 586 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 GPR21Q99679 349 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 EBNA1BP2Q99848 306 aaKnown RBP23.53■■□□□ 1.36
SNF8-213ENST00000514929 NAT9Q9BTE0 207 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 DHRS4Q9BTZ2 278 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 TLK1Q9UKI8 766 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 TP53TG5Q9Y2B4 290 aa23.53■■□□□ 1.36
SNF8-213ENST00000514929 SPTA1P02549 2419 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 ARGFXA6NJG6 315 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 TARM1B6A8C7 271 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 PYCARD-AS1I3L0S3 204 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 ERVK-10P10266 1014 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 IVDP26440 423 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 DCDP81605 110 aaKnown RBP23.52■■□□□ 1.36
SNF8-213ENST00000514929 MSS51Q4VC12 460 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 SPANXN3Q5MJ09 141 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 OR2L3Q8NG85 312 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 OR2A1Q8NGT9 310 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 GIMAP7Q8NHV1 300 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 DLG3Q92796 817 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 INPP5DQ92835 1189 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 IFT80Q9P2H3 777 aaPredicted RBP23.52■■□□□ 1.36
SNF8-213ENST00000514929 NDOR1Q9UHB4 597 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 MED16Q9Y2X0 877 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 DHRS7Q9Y394 339 aa23.52■■□□□ 1.36
SNF8-213ENST00000514929 VPS26AO75436 327 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 DNAJB5O75953 348 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 ENO3P13929 434 aaPredicted RBP23.51■■□□□ 1.35
SNF8-213ENST00000514929 CHAF1BQ13112 559 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 FASTKQ14296 549 aaKnown RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms