RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 FBXO39Q8N4B4 442 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 LINC01555Q8NAE3 123 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 RHBDD1Q8TEB9 315 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 SETD7Q8WTS6 366 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 SMPDL3AQ92484 453 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 SLC22A18Q96BI1 424 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 L3HYPDHQ96EM0 354 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 PCBD2Q9H0N5 130 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 SRMSQ9H3Y6 488 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 KCNK9Q9NPC2 374 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 OXSMQ9NWU1 459 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 FAM53CQ9NYF3 392 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 UTP6Q9NYH9 597 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 CD274Q9NZQ7 290 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 CPSF2Q9P2I0 782 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 FTSJ1Q9UET6 329 aa11.6□□□□□ -0.55
PDLIM5-220ENST00000514830 UNC13CQ8NB66 2214 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 MAP1BP46821 2468 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 IGHV1OR21-1A0A087WYE8 117 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 OR5K3A6NET4 321 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 A8MT66 165 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 H3BQF6 201 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 TAPBPO15533 448 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 TNFSF14O43557 240 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 SH3BP5O60239 455 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 GDF9O60383 454 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 UBXN7O94888 489 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 GUCA1CO95843 209 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 BPGMP07738 259 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 GFAPP14136 432 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 NR1D1P20393 614 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 IMPDH1P20839 514 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 CAPZBP47756 277 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 SERPINB4P48594 390 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 PIK3CGP48736 1102 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 WDR4P57081 412 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 HERVK_113P63132 956 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 ASPHQ12797 758 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 BIRC2Q13490 618 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 PLCL1Q15111 1095 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 WDR74Q6RFH5 385 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 MBOAT1Q6ZNC8 495 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 LRRC70Q7Z2Q7 622 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 SPRED1Q7Z699 444 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 ARFGAP2Q8N6H7 521 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 ARMC2Q8NEN0 867 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 OR6Y1Q8NGX8 325 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 WDR48Q8TAF3 677 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 ZBTB9Q96C00 473 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 CNDP2Q96KP4 475 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 SLC38A3Q99624 504 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 MIPEPQ99797 713 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 EGFL8Q99944 293 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 DPYSL5Q9BPU6 564 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 TMEM79Q9BSE2 394 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 ERVK-6Q9BXR3 956 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 CD244Q9BZW8 370 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 C12orf65Q9H3J6 166 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 NKIRAS1Q9NYS0 192 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 OGFRQ9NZT2 677 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 ANGPTL2Q9UKU9 493 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 KLK4Q9Y5K2 254 aa11.59□□□□□ -0.55
PDLIM5-220ENST00000514830 CHD8Q9HCK8 2581 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 A0A1W2PPV9 198 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 TM4SF5O14894 197 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 B4GAT1O43505 415 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 TRIM13O60858 407 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 H2AFYO75367 372 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 STK16O75716 305 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 RPS17P08708 135 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 CHRM5P08912 532 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 CDK4P11802 303 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 CSRP1P21291 193 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 SERPINB5P36952 375 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 DAB2P98082 770 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 E2F2Q14209 437 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 PFKFB4Q16877 469 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 PTCHD3Q3KNS1 767 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 ZNF678Q5SXM1 525 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 LIPMQ5VYY2 423 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 CAPN13Q6MZZ7 669 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 GUSBP11Q6P575 273 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 LCTLQ6UWM7 567 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 RAB44Q7Z6P3 723 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 OOSP2Q86WS3 158 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 SYTL1Q8IYJ3 562 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 PTGR2Q8N8N7 351 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 OR4E2Q8NGC2 313 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 OR10G6Q8NH81 332 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 FLVCR1-AS1Q8TAF5 88 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 RAB3IL1Q8TBN0 382 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 IFI44Q8TCB0 444 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 SREK1Q8WXA9 508 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 CCDC74AQ96AQ1 378 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 CD180Q99467 661 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 HAUS8Q9BT25 410 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 TBC1D10AQ9BXI6 508 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 SLC32A1Q9H598 525 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 CCDC177Q9NQR7 707 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 KCNK4Q9NYG8 393 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms