RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SF1Q15637 639 aaKnown RBP11.71□□□□□ -0.53
SNHG4-208ENST00000514110 CYP2A13Q16696 494 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 CCSMST1Q4G0I0 132 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 CRB2Q5IJ48 1285 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 PCID2Q5JVF3 399 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 FIGLAQ6QHK4 219 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 OVCH1Q7RTY7 1134 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 GAS2L3Q86XJ1 694 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 DTWD1Q8N5C7 304 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 RNF10Q8N5U6 811 aaKnown RBP11.71□□□□□ -0.53
SNHG4-208ENST00000514110 CCDC89Q8N998 374 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 PEX13Q92968 403 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 FKBP10Q96AY3 582 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 ZNF285Q96NJ3 590 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 SPSB2Q99619 263 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 P2RY12Q9H244 342 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 SLC6A20Q9NP91 592 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 ATP13A2Q9NQ11 1180 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 CUTCQ9NTM9 273 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 PAK5Q9P286 719 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 ANAPC5Q9UJX4 755 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 SLC39A10Q9ULF5 831 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 RUVBL2Q9Y230 463 aaKnown RBP11.71□□□□□ -0.53
SNHG4-208ENST00000514110 NFS1Q9Y697 457 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 NUP210LQ5VU65 1888 aa11.71□□□□□ -0.53
SNHG4-208ENST00000514110 ICE1Q9Y2F5 2266 aa11.71□□□□□ -0.54
SNHG4-208ENST00000514110 SPTAN1Q13813 2472 aaKnown RBP11.7□□□□□ -0.54
SNHG4-208ENST00000514110 TEX15Q9BXT5 2789 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 A1L4Q6 167 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 SOCS6O14544 535 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 DSCR3O14972 297 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 NRP2O60462 931 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 CTSVO60911 334 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 C1orf105O95561 183 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 MMP11P24347 488 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 PSMB5P28074 263 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 NMBRP28336 390 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 BDKRB1P46663 353 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 OR1D4P47884 311 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 TTPAP49638 278 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 ESPL1Q14674 2120 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 TMED2Q15363 201 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 NKG7Q16617 165 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 AARS2Q5JTZ9 985 aaKnown RBP11.7□□□□□ -0.54
SNHG4-208ENST00000514110 PTRHD1Q6GMV3 140 aaKnown RBP11.7□□□□□ -0.54
SNHG4-208ENST00000514110 Q6ZS92 163 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 SHISA6Q6ZSJ9 500 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 CUZD1Q86UP6 607 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 LURAP1LQ8IV03 231 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 METTL27Q8N6F8 245 aaPredicted RBP11.7□□□□□ -0.54
SNHG4-208ENST00000514110 SPC24Q8NBT2 197 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 ILKAPQ9H0C8 392 aaPredicted RBP11.7□□□□□ -0.54
SNHG4-208ENST00000514110 SOX17Q9H6I2 414 aaPredicted RBP11.7□□□□□ -0.54
SNHG4-208ENST00000514110 WDR54Q9H977 334 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 ENAMQ9NRM1 1142 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 TREX1Q9NSU2 369 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 INTS7Q9NVH2 962 aaKnown RBP11.7□□□□□ -0.54
SNHG4-208ENST00000514110 CTSFQ9UBX1 484 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 ERRFI1Q9UJM3 462 aaPredicted RBP11.7□□□□□ -0.54
SNHG4-208ENST00000514110 CDC23Q9UJX2 597 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 FBXL4Q9UKA2 621 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 TTC7AQ9ULT0 858 aaPredicted RBP11.7□□□□□ -0.54
SNHG4-208ENST00000514110 GUCA1BQ9UMX6 200 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 NTNG1Q9Y2I2 539 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 CSAG2Q9Y5P2 127 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 PCM1Q15154 2024 aa11.7□□□□□ -0.54
SNHG4-208ENST00000514110 KLHL41O60662 606 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 IPO13O94829 963 aaKnown RBP11.69□□□□□ -0.54
SNHG4-208ENST00000514110 MED26O95402 600 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 DDAH2O95865 285 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 ALBP02768 609 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 RPS3P23396 243 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNHG4-208ENST00000514110 ITGA3P26006 1051 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 VSX2P58304 361 aaPredicted RBP11.69□□□□□ -0.54
SNHG4-208ENST00000514110 AIMP2Q13155 320 aaKnown RBP11.69□□□□□ -0.54
SNHG4-208ENST00000514110 GRM7Q14831 915 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 KCTD19Q17RG1 926 aaPredicted RBP11.69□□□□□ -0.54
SNHG4-208ENST00000514110 ZC3H12BQ5HYM0 836 aaKnown RBP11.69□□□□□ -0.54
SNHG4-208ENST00000514110 TCTE1Q5JU00 501 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 CTSL3PQ5NE16 218 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 PRAMEF13Q5VWM6 474 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 FRMPD2BQ6IN97 320 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 KIRREL2Q6UWL6 708 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 ZADH2Q8N4Q0 377 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 TTC29Q8NA56 475 aaPredicted RBP11.69□□□□□ -0.54
SNHG4-208ENST00000514110 DENND1AQ8TEH3 1009 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 RAD51AP1Q96B01 352 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 NACC2Q96BF6 587 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 SELENOSQ9BQE4 189 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 RAB11FIP5Q9BXF6 653 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 SLC26A1Q9H2B4 701 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 EIF2B3Q9NR50 452 aaKnown RBP11.69□□□□□ -0.54
SNHG4-208ENST00000514110 GNPTGQ9UJJ9 305 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 PCDHGA10Q9Y5H3 936 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 HS3ST3B1Q9Y662 390 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 COPG1Q9Y678 874 aaKnown RBP11.69□□□□□ -0.54
SNHG4-208ENST00000514110 MAU2Q9Y6X3 613 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 ANKRD12Q6UB98 2062 aa11.69□□□□□ -0.54
SNHG4-208ENST00000514110 LOC105369274A0A096LPK9 316 aa11.68□□□□□ -0.54
SNHG4-208ENST00000514110 LOC102723532A0A0G2JNH3 316 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms