RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 CDHR3Q6ZTQ4 885 aa14□□□□□ -0.17
LETM1-207ENST00000512669 MRGPREQ86SM8 312 aa14□□□□□ -0.17
LETM1-207ENST00000512669 TCTN2Q96GX1 697 aa14□□□□□ -0.17
LETM1-207ENST00000512669 BIRC8Q96P09 236 aa14□□□□□ -0.17
LETM1-207ENST00000512669 TTC1Q99614 292 aa14□□□□□ -0.17
LETM1-207ENST00000512669 AGPAT4Q9NRZ5 378 aa14□□□□□ -0.17
LETM1-207ENST00000512669 ASF1BQ9NVP2 202 aa14□□□□□ -0.17
LETM1-207ENST00000512669 TRMT1Q9NXH9 659 aaKnown RBP14□□□□□ -0.17
LETM1-207ENST00000512669 GPN3Q9UHW5 284 aaPredicted RBP14□□□□□ -0.17
LETM1-207ENST00000512669 TDRKHQ9Y2W6 561 aaKnown RBP14□□□□□ -0.17
LETM1-207ENST00000512669 AP1M2Q9Y6Q5 423 aa14□□□□□ -0.17
LETM1-207ENST00000512669 PIKFYVEQ9Y2I7 2098 aa14□□□□□ -0.17
LETM1-207ENST00000512669 H3BMH7 237 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 F7P08709 466 aaPredicted RBP13.99□□□□□ -0.17
LETM1-207ENST00000512669 RPS3P23396 243 aaKnown RBP eCLIP13.99□□□□□ -0.17
LETM1-207ENST00000512669 OTX2P32243 289 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 SHMT2P34897 504 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 FOLR3P41439 243 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 TTPAP49638 278 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 PER3P56645 1201 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 PLOD1Q02809 727 aaPredicted RBP13.99□□□□□ -0.17
LETM1-207ENST00000512669 PTCHD3Q3KNS1 767 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 PLEKHN1Q494U1 663 aaPredicted RBP13.99□□□□□ -0.17
LETM1-207ENST00000512669 SYTL3Q4VX76 610 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 DCAF10Q5QP82 559 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 HOOK3Q86VS8 718 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 FAM20CQ8IXL6 584 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 GALNT16Q8N428 558 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 ZADH2Q8N4Q0 377 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 CISD2Q8N5K1 135 aaKnown RBP13.99□□□□□ -0.17
LETM1-207ENST00000512669 LINC01555Q8NAE3 123 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 PROKR1Q8TCW9 393 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 N4BP2L2Q92802 583 aaPredicted RBP13.99□□□□□ -0.17
LETM1-207ENST00000512669 C19orf60Q96EN9 201 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 OSBPL9Q96SU4 736 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 IL1RAPL1Q9NZN1 696 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 GALPQ9UBC7 116 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 CIDEBQ9UHD4 219 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 POLG2Q9UHN1 485 aa13.99□□□□□ -0.17
LETM1-207ENST00000512669 KRT87PA6NCN2 255 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 USP27XA6NNY8 438 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 AP3B1O00203 1094 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 ZNF749O43361 778 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 NRDCO43847 1150 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 COL8A1P27658 744 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 PKLRP30613 574 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 SOX8P57073 446 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 TYSND1Q2T9J0 566 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 CCSMST1Q4G0I0 132 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 DNAJC21Q5F1R6 531 aaKnown RBP13.98□□□□□ -0.17
LETM1-207ENST00000512669 AARS2Q5JTZ9 985 aaKnown RBP13.98□□□□□ -0.17
LETM1-207ENST00000512669 ZNF385CQ66K41 422 aaPredicted RBP13.98□□□□□ -0.17
LETM1-207ENST00000512669 CCDC137Q6PK04 289 aaKnown RBP13.98□□□□□ -0.17
LETM1-207ENST00000512669 CENPUQ71F23 418 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 ACTRT1Q8TDG2 376 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 ASZ1Q8WWH4 475 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 LPGAT1Q92604 370 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 NACC2Q96BF6 587 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 IL17FQ96PD4 163 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 BARD1Q99728 777 aaKnown RBP13.98□□□□□ -0.17
LETM1-207ENST00000512669 CHRNA10Q9GZZ6 450 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 OR6C2Q9NZP2 312 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 ANAPC5Q9UJX4 755 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 SNX12Q9UMY4 172 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 COPG1Q9Y678 874 aaKnown RBP13.98□□□□□ -0.17
LETM1-207ENST00000512669 NFS1Q9Y697 457 aa13.98□□□□□ -0.17
LETM1-207ENST00000512669 ZCWPW2A0A1B0GU75 182 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 GOLGA8MH3BSY2 632 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 PGRMC1O00264 195 aaKnown RBP13.97□□□□□ -0.17
LETM1-207ENST00000512669 NDUFS3O75489 264 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 KLF7O75840 302 aaPredicted RBP13.97□□□□□ -0.17
LETM1-207ENST00000512669 TNFRSF8P28908 595 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 FMO4P31512 558 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 PPARGP37231 505 aaPredicted RBP13.97□□□□□ -0.17
LETM1-207ENST00000512669 MAGEA3P43357 314 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 RAPSNQ13702 412 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 GBX1Q14549 363 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 ANKRD20A4Q4UJ75 823 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 FAM69BQ5VUD6 431 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 PTRHD1Q6GMV3 140 aaKnown RBP13.97□□□□□ -0.17
LETM1-207ENST00000512669 KIAA0930Q6ICG6 404 aaPredicted RBP13.97□□□□□ -0.17
LETM1-207ENST00000512669 RHBDD2Q6NTF9 364 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 Q6ZS92 163 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 DNAJC22Q8N4W6 341 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 C2orf73Q8N5S3 287 aaPredicted RBP13.97□□□□□ -0.17
LETM1-207ENST00000512669 NAT8LQ8N9F0 302 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 C19orf47Q8N9M1 422 aaKnown RBP13.97□□□□□ -0.17
LETM1-207ENST00000512669 ST6GALNAC3Q8NDV1 305 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 MCUQ8NE86 351 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 CFAP61Q8NHU2 1237 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 SERPINB12Q96P63 405 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 NDOR1Q9UHB4 597 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 SRPK3Q9UPE1 567 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 RUVBL2Q9Y230 463 aaKnown RBP13.97□□□□□ -0.17
LETM1-207ENST00000512669 KLHL20Q9Y2M5 609 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 PCDHGA10Q9Y5H3 936 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 PCM1Q15154 2024 aa13.97□□□□□ -0.17
LETM1-207ENST00000512669 DIDO1Q9BTC0 2240 aaKnown RBP13.96□□□□□ -0.17
LETM1-207ENST00000512669 TEP1Q99973 2627 aaKnown RBP13.96□□□□□ -0.17
LETM1-207ENST00000512669 PRICKLE3O43900 615 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms