RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 SH3RF2Q8TEC5 729 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 SLC45A3Q96JT2 553 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 RIOK2Q9BVS4 552 aaKnown RBP7.87□□□□□ -1.15
NEK1-208ENST00000512193 YTHDF1Q9BYJ9 559 aaKnown RBP7.87□□□□□ -1.15
NEK1-208ENST00000512193 WDR6Q9NNW5 1121 aaKnown RBP7.87□□□□□ -1.15
NEK1-208ENST00000512193 PTBP2Q9UKA9 531 aaKnown RBP7.87□□□□□ -1.15
NEK1-208ENST00000512193 OR10H1Q9Y4A9 318 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 UBR2Q8IWV8 1755 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 A0A1W2PRB8 838 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 CA12O43570 354 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 DNAJA1P31689 397 aaKnown RBP7.87□□□□□ -1.15
NEK1-208ENST00000512193 ABHD18Q0P651 414 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 SLBPQ14493 270 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEK1-208ENST00000512193 OR4D1Q15615 310 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 FAM46CQ5VWP2 391 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 SMYD5Q6GMV2 418 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 PSAPL1Q6NUJ1 521 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.87□□□□□ -1.15
NEK1-208ENST00000512193 LGI4Q8N135 537 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 C2orf15Q8WU43 125 aaKnown RBP7.87□□□□□ -1.15
NEK1-208ENST00000512193 TP53INP1Q96A56 240 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 LRCH3Q96II8 777 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 C1orf74Q96LT6 269 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 MARCH7Q9H992 704 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.87□□□□□ -1.15
NEK1-208ENST00000512193 SNTG1Q9NSN8 517 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 NLE1Q9NVX2 485 aaPredicted RBP7.87□□□□□ -1.15
NEK1-208ENST00000512193 NKIRAS2Q9NYR9 191 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 Q9Y3F1 56 aa7.87□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3DA0A087WVF3 549 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3IA0A087WXS9 549 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3EA0A087X179 549 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3KA0A087X1G2 549 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3FA6NER0 549 aaPredicted RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3LB9A6J9 549 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 KDELR3O43731 214 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 ADH1CP00326 375 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 C8BP07358 591 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3HP0C7X1 549 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 CTSEP14091 401 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 AFF1P51825 1210 aaKnown RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 CREMQ03060 361 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 RNASE12Q5GAN4 147 aaKnown RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3GQ6DHY5 549 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3CQ6IPX1 549 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 ANKRD26P1Q6NSI1 321 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 USP30Q70CQ3 517 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TBC1D3Q8IZP1 549 aaPredicted RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 KREMEN2Q8NCW0 462 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 AP3S1Q92572 193 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 ISOC1Q96CN7 298 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 PKP4Q99569 1192 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 SLC29A1Q99808 456 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 GPR62Q9BZJ7 368 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 POLR2J2Q9GZM3 115 aaKnown RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 RSPH9Q9H1X1 276 aaPredicted RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 DCSTAMPQ9H295 470 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 MEAF6Q9HAF1 191 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TPT1P8Q9HAU6 139 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 FLRT1Q9NZU1 646 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 FBXW2Q9UKT8 454 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 CHD4Q14839 1912 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 SAGE2PA6NJ88 616 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 UPK3BL1B0FP48 263 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 UPK3BL2E5RIL1 263 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 H3BNH8 94 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 C9P02748 559 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 C4BPBP20851 252 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 MAGEA6P43360 314 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 PSMD8P48556 350 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 CCT3P49368 545 aaKnown RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 BIKQ13323 160 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 HEPACAMQ14CZ8 416 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 HLA-DQA1Q5Y7H0 255 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 LAPTM4BQ86VI4 370 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 IFNL1Q8IU54 200 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TMEM126BQ8IUX1 230 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 RGL4Q8IZJ4 473 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 GATA6Q92908 595 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 SLC38A4Q969I6 547 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 PYURFQ96I23 114 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 FAM210AQ96ND0 272 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 ZNF382Q96SR6 550 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 POLR2J3Q9H1A7 115 aaKnown RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 R3HDMLQ9H3Y0 253 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 SMOXQ9NWM0 555 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 GIN1Q9NXP7 522 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 ZNF282Q9UDV7 671 aaPredicted RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 ITGB1BP2Q9UKP3 347 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 DHRS7Q9Y394 339 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 MYO5AQ9Y4I1 1855 aaKnown RBP7.86□□□□□ -1.15
NEK1-208ENST00000512193 LTBP3Q9NS15 1303 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 DNAJC25-GNG10A0A024R161 153 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 SOCS2O14508 198 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 PGRMC2O15173 223 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 PI15O43692 258 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 TLL1O43897 1013 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 HLA-DQA2P01906 255 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 PRNPP04156 253 aa7.86□□□□□ -1.15
NEK1-208ENST00000512193 INHAP05111 366 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms