RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 CYS1Q717R9 158 aa12.04□□□□□ -0.48
PTCD2-209ENST00000511752 TIPARPQ7Z3E1 657 aaKnown RBP12.04□□□□□ -0.48
PTCD2-209ENST00000511752 PIWIL4Q7Z3Z4 852 aaKnown RBP12.04□□□□□ -0.48
PTCD2-209ENST00000511752 VASH2Q86V25 355 aa12.04□□□□□ -0.48
PTCD2-209ENST00000511752 ZC3HC1Q86WB0 502 aaKnown RBP12.04□□□□□ -0.48
PTCD2-209ENST00000511752 NOA1Q8NC60 698 aaKnown RBP12.04□□□□□ -0.48
PTCD2-209ENST00000511752 MCOLN3Q8TDD5 553 aa12.04□□□□□ -0.48
PTCD2-209ENST00000511752 DENND1AQ8TEH3 1009 aa12.04□□□□□ -0.48
PTCD2-209ENST00000511752 EEF1AKMT1Q8WVE0 214 aa12.04□□□□□ -0.48
PTCD2-209ENST00000511752 LINGO1Q96FE5 620 aa12.04□□□□□ -0.48
PTCD2-209ENST00000511752 EFHD1Q9BUP0 239 aa12.04□□□□□ -0.48
PTCD2-209ENST00000511752 CHRNA10Q9GZZ6 450 aa12.04□□□□□ -0.48
PTCD2-209ENST00000511752 GPN2Q9H9Y4 310 aaPredicted RBP12.04□□□□□ -0.48
PTCD2-209ENST00000511752 MTRF1LQ9UGC7 380 aaKnown RBP12.04□□□□□ -0.48
PTCD2-209ENST00000511752 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 ANKRD11Q6UB99 2663 aaPredicted RBP12.03□□□□□ -0.48
PTCD2-209ENST00000511752 TEX51A0A1B0GUA7 166 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 TCRBV9S1A1TA0A576 114 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 KRT87PA6NCN2 255 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 PABPN1LA6NDY0 278 aaKnown RBP12.03□□□□□ -0.48
PTCD2-209ENST00000511752 CPNE3O75131 537 aaKnown RBP12.03□□□□□ -0.48
PTCD2-209ENST00000511752 SCRG1O75711 98 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 TIAF1O95411 115 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 CCNYL3P0C7X3 344 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 ERGP11308 486 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 ZNF28P17035 718 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 MAGP20916 626 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 SAT1P21673 171 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 STX2P32856 288 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 PNLIPRP1P54315 467 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 SLC12A2P55011 1212 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 ITGA1P56199 1179 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 NAA25Q14CX7 972 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 GPR135Q8IZ08 494 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 LMNTD1Q8N9Z9 388 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 GALNT6Q8NCL4 622 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 SNRNP27Q8WVK2 155 aaKnown RBP12.03□□□□□ -0.48
PTCD2-209ENST00000511752 SMPDL3AQ92484 453 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 RNF31Q96EP0 1072 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 VPS39Q96JC1 886 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 PKP4Q99569 1192 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 CPNE1Q99829 537 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 SLC7A5P2Q9GIP4 190 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 TSPYL1Q9H0U9 437 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 RHOJQ9H4E5 214 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 ZDHHC18Q9NUE0 388 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 DMGDHQ9UI17 866 aaKnown RBP12.03□□□□□ -0.48
PTCD2-209ENST00000511752 PADI1Q9ULC6 663 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 PCDHB3Q9Y5E6 796 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 PCM1Q15154 2024 aa12.03□□□□□ -0.48
PTCD2-209ENST00000511752 SNRNP200O75643 2136 aaKnown RBP12.02□□□□□ -0.48
PTCD2-209ENST00000511752 LOC101059948A0A1B0GTJ6 334 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 FAM159BA6NKW6 160 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 E7EQ34 232 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 SLC16A5O15375 505 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 EFSO43281 561 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 PRICKLE3O43900 615 aaPredicted RBP12.02□□□□□ -0.49
PTCD2-209ENST00000511752 SLC16A8O95907 504 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 NTRK1P04629 796 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 KLK3P07288 261 aaPredicted RBP12.02□□□□□ -0.49
PTCD2-209ENST00000511752 HBQ1P09105 142 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 HIST1H2AGP0C0S8 130 aaPredicted RBP12.02□□□□□ -0.49
PTCD2-209ENST00000511752 LIFP15018 202 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 HIST1H2ADP20671 130 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 PSMB5P28074 263 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 CMPK1P30085 196 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 RPA3P35244 121 aaPredicted RBP12.02□□□□□ -0.49
PTCD2-209ENST00000511752 STAT5AP42229 794 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 GPX6P59796 221 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 SRSF6Q13247 344 aaKnown RBP12.02□□□□□ -0.49
PTCD2-209ENST00000511752 TSTA3Q13630 321 aaPredicted RBP12.02□□□□□ -0.49
PTCD2-209ENST00000511752 FASTKQ14296 549 aaKnown RBP12.02□□□□□ -0.49
PTCD2-209ENST00000511752 ZIC1Q15915 447 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 ZC3H12BQ5HYM0 836 aaKnown RBP12.02□□□□□ -0.49
PTCD2-209ENST00000511752 FIGLAQ6QHK4 219 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 CTAGE3PQ8IX95 158 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 FAM20CQ8IXL6 584 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 SYTL1Q8IYJ3 562 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 OR2L3Q8NG85 312 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 OR1L3Q8NH93 324 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 ZUFSPQ96AP4 578 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 HIST1H2AHQ96KK5 128 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 OLFM1Q99784 485 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 MIPEPQ99797 713 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 HIST1H2AJQ99878 128 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 H2AFJQ9BTM1 129 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 TRIM54Q9BYV2 358 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 PARVBQ9HBI1 364 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 LRRC4CQ9HCJ2 640 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 FAM60AQ9NP50 221 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 SMYD2Q9NRG4 433 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 PLCL2Q9UPR0 1127 aa12.02□□□□□ -0.49
PTCD2-209ENST00000511752 A0A1W2PPV9 198 aa12.01□□□□□ -0.49
PTCD2-209ENST00000511752 TARM1B6A8C7 271 aa12.01□□□□□ -0.49
PTCD2-209ENST00000511752 PIAS1O75925 651 aa12.01□□□□□ -0.49
PTCD2-209ENST00000511752 OR2B3O76000 313 aa12.01□□□□□ -0.49
PTCD2-209ENST00000511752 CCNDBP1O95273 360 aa12.01□□□□□ -0.49
PTCD2-209ENST00000511752 ZNF37AP17032 561 aaPredicted RBP12.01□□□□□ -0.49
PTCD2-209ENST00000511752 PHBP35232 272 aa12.01□□□□□ -0.49
PTCD2-209ENST00000511752 GP5P40197 560 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms