RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CHRNB4P30926 498 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 OPRM1P35372 400 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 HMGCLP35914 325 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PRKCIP41743 596 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PTDSS1P48651 473 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CCR8P51685 355 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 DYNLT1P63172 113 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 TBX2Q13207 712 aaPredicted RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 C16orf72Q14CZ0 275 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 LLGL1Q15334 1064 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ETFDHQ16134 617 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 RPE65Q16518 533 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 BCL7AQ4VC05 210 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PCID2Q5JVF3 399 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 GPRC6AQ5T6X5 926 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 SCARA3Q6AZY7 606 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 NADSYN1Q6IA69 706 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 TTLL10Q6ZVT0 673 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ADAMTSL2Q86TH1 951 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CILP2Q8IUL8 1156 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ZC3H3Q8IXZ2 948 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 SMYD4Q8IYR2 804 aaPredicted RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 FBXW8Q8N3Y1 598 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 D2HGDHQ8N465 521 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CISD2Q8N5K1 135 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CSNK1A1LQ8N752 337 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 NIPA2Q8N8Q9 360 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 SLC30A5Q8TAD4 765 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 DCAKDQ8WVC6 231 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 RNF166Q96A37 237 aaPredicted RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 RTP4Q96DX8 246 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CCDC138Q96M89 665 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PHACTR1Q9C0D0 580 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CHST8Q9H2A9 424 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ACTL8Q9H568 366 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 RDH14Q9HBH5 336 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ASCL3Q9NQ33 180 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PPANQ9NQ55 473 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 FSCN3Q9NQT6 498 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PRODH2Q9UF12 536 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 HMGXB4Q9UGU5 601 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 SLC13A4Q9UKG4 626 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 INTS6Q9UL03 887 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 SHOC2Q9UQ13 582 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 RUVBL1Q9Y265 456 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 TMEM98Q9Y2Y6 226 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 TNPO3Q9Y5L0 923 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ASCC3Q8N3C0 2202 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 NUMA1Q14980 2115 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PLXNA4Q9HCM2 1894 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 SPTBN5Q9NRC6 3674 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 A0A0D9SEW6 157 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TMEM191CA6NGB0 347 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ERICH4A6NGS2 130 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 A8MX80 341 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 APOC4-APOC2K7ER74 178 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TRIM24O15164 1050 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SMIM24O75264 130 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 HSPA4LO95757 839 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 APOC2P02655 101 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TSPAN8P19075 237 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ETV3P41162 512 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 GUCA1AP43080 201 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PRSS12P56730 875 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 CAV1Q03135 178 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ZNF33BQ06732 778 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 HSPA14Q0VDF9 509 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SNX1Q13596 522 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PTPRCAPQ14761 206 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SLC9A5Q14940 896 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 NR1D2Q14995 579 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SLMAPQ14BN4 828 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SETDB1Q15047 1291 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 CYTH1Q15438 398 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 MOGQ16653 247 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PERM1Q5SV97 790 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 RHBDD2Q6NTF9 364 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 FAM151BQ6UXP7 276 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 RBMS3Q6XE24 437 aaKnown RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SLC26A11Q86WA9 606 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SLITRK4Q8IW52 837 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 UNC5BQ8IZJ1 945 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 DDHD1Q8NEL9 900 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 C1orf216Q8TAB5 229 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TMEM171Q8WVE6 324 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 FAR1Q8WVX9 515 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 ASB11Q8WXH4 323 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 INPP5DQ92835 1189 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SDCCAG3Q96C92 435 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 MMABQ96EY8 250 aaPredicted RBP2.74□□□□□ -1.97
CLOCK-209ENST00000511124 VMP1Q96GC9 406 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 PBKQ96KB5 322 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 HS6ST2Q96MM7 605 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 SPATA13Q96N96 652 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 OR1F2PQ96R84 312 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 OCSTAMPQ9BR26 566 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 TRIM4Q9C037 500 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 NOD2Q9HC29 1040 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 UCKL1Q9NWZ5 548 aa2.74□□□□□ -1.97
CLOCK-209ENST00000511124 QPCTLQ9NXS2 382 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms