RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 LINGO1Q96FE5 620 aa13.47□□□□□ -0.25
DDX41-212ENST00000511040 TCTN2Q96GX1 697 aa13.47□□□□□ -0.25
DDX41-212ENST00000511040 MIPEPQ99797 713 aa13.47□□□□□ -0.25
DDX41-212ENST00000511040 GPN2Q9H9Y4 310 aaPredicted RBP13.47□□□□□ -0.25
DDX41-212ENST00000511040 ABCF3Q9NUQ8 709 aa13.47□□□□□ -0.25
DDX41-212ENST00000511040 SPATA7Q9P0W8 599 aa13.47□□□□□ -0.25
DDX41-212ENST00000511040 IL17BQ9UHF5 180 aa13.47□□□□□ -0.25
DDX41-212ENST00000511040 ADAMTS6Q9UKP5 1117 aa13.47□□□□□ -0.25
DDX41-212ENST00000511040 VWA7Q9Y334 891 aa13.47□□□□□ -0.25
DDX41-212ENST00000511040 PCDHGA4Q9Y5G9 962 aa13.47□□□□□ -0.25
DDX41-212ENST00000511040 SPTBP11277 2137 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 A0A1W2PPV9 198 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 TCRBV9S1A1TA0A576 114 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 GFYI3L273 518 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 PRICKLE3O43900 615 aaPredicted RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 CYP2A7P20853 494 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 FDXRP22570 491 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 STAT5AP42229 794 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 GRIA3P42263 894 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 SKIV2L2P42285 1042 aaKnown RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 MAGEA4P43358 317 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 GPX6P59796 221 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 YBX1P67809 324 aaKnown RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 PDAP1Q13442 181 aaKnown RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 SUSD1Q6UWL2 747 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 C3orf62Q6ZUJ4 267 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 UBE2R2Q712K3 238 aaPredicted RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 BPHLQ86WA6 291 aaPredicted RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 ZC3HC1Q86WB0 502 aaKnown RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 PPFIBP2Q8ND30 876 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 OR8K5Q8NH50 307 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 DLG3Q92796 817 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 N4BP2L2Q92802 583 aaPredicted RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 KIAA1143Q96AT1 154 aaPredicted RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 SLC22A18Q96BI1 424 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 ACAT2Q9BWD1 397 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 SPRTNQ9H040 489 aaPredicted RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 AKIRIN1Q9H9L7 192 aaPredicted RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 ZDHHC18Q9NUE0 388 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 DMGDHQ9UI17 866 aaKnown RBP13.46□□□□□ -0.25
DDX41-212ENST00000511040 CROTQ9UKG9 612 aa13.46□□□□□ -0.25
DDX41-212ENST00000511040 ITPR1Q14643 2758 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 NBEAQ8NFP9 2946 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 FAM95CA0A1B0GW59 222 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 ZBTB14O43829 449 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 NRP2O60462 931 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 SLC16A8O95907 504 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 CCNYL3P0C7X3 344 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 F8A1P23610 371 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 DLSTP36957 453 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 RGS4P49798 205 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 PNLIPRP1P54315 467 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 ITGA1P56199 1179 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 ABHD18Q0P651 414 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 GPS2Q13227 327 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 MAP7Q14244 749 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 ZNF460Q14592 562 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 FCRL6Q6DN72 434 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 FAM45BPQ6NSW5 357 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 FIGLAQ6QHK4 219 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 MBOAT1Q6ZNC8 495 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 SLC26A11Q86WA9 606 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 MYO1HQ8N1T3 1032 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 DNAJC22Q8N4W6 341 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 SLC38A9Q8NBW4 561 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 HMGCLL1Q8TB92 370 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 FAM45AQ8TCE6 357 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 CT55Q8WUE5 264 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 IFT81Q8WYA0 676 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 FCRL4Q96PJ5 515 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 RUFY1Q96T51 708 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 SERTAD3Q9UJW9 196 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 PADI1Q9ULC6 663 aa13.45□□□□□ -0.26
DDX41-212ENST00000511040 CORO1CQ9ULV4 474 aaPredicted RBP13.45□□□□□ -0.26
DDX41-212ENST00000511040 MRPS18BQ9Y676 258 aaKnown RBP13.45□□□□□ -0.26
DDX41-212ENST00000511040 EIF3FO00303 357 aaPredicted RBP13.44□□□□□ -0.26
DDX41-212ENST00000511040 CPNE3O75131 537 aaKnown RBP13.44□□□□□ -0.26
DDX41-212ENST00000511040 KATNA1O75449 491 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 OR2B3O76000 313 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 TSPAN12O95859 305 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 PRKAR1AP10644 381 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 ERGP11308 486 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 RPA3P35244 121 aaPredicted RBP13.44□□□□□ -0.26
DDX41-212ENST00000511040 GABRA4P48169 554 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 TAS2R39P59534 338 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 IL2P60568 153 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 EFTUD2Q15029 972 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDX41-212ENST00000511040 LCN10Q6JVE6 187 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 FAM199XQ6PEV8 388 aaPredicted RBP13.44□□□□□ -0.26
DDX41-212ENST00000511040 TMEM207Q6UWW9 146 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 MCATQ8IVS2 390 aaKnown RBP13.44□□□□□ -0.26
DDX41-212ENST00000511040 CTAGE3PQ8IX95 158 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 SYTL1Q8IYJ3 562 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 ZSCAN1Q8NBB4 408 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 OR2L3Q8NG85 312 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 OR2A1Q8NGT9 310 aa13.44□□□□□ -0.26
DDX41-212ENST00000511040 ZNF480Q8WV37 535 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms